RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 FGF13Q92913 245 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 MRPL38Q96DV4 380 aaKnown RBP18.55■□□□□ 0.56
RARA-201ENST00000254066 CLCC1Q96S66 551 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 PFDN5Q99471 154 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 A0A1W2PS29 197 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 METTL21EPA6NDL7 271 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 UPK3AO75631 287 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 GLCEO94923 617 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 CRHP06850 196 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 GLP1RP43220 463 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 EFNB2P52799 333 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 EIF5AP63241 154 aaKnown RBP18.55■□□□□ 0.56
RARA-201ENST00000254066 SHHQ15465 462 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 EIF5AL1Q6IS14 154 aaKnown RBP18.55■□□□□ 0.56
RARA-201ENST00000254066 NRROSQ86YC3 692 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 NPEPL1Q8NDH3 523 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 TMED6Q8WW62 240 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 SPACA7Q96KW9 195 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 OR5B2Q96R09 309 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 IL21Q9HBE4 155 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 IL36AQ9UHA7 158 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 FBXO4Q9UKT5 387 aa18.55■□□□□ 0.56
RARA-201ENST00000254066 A0A0B4J2E0 115 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 CENPVL1A0A0U1RR11 272 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 A0A1B0GX12 115 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 C1QTNF3-AMACRE9PGA6 284 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 HOXC4P09017 264 aaPredicted RBP18.54■□□□□ 0.56
RARA-201ENST00000254066 AK4P27144 223 aaPredicted RBP18.54■□□□□ 0.56
RARA-201ENST00000254066 PRDX1Q06830 199 aaKnown RBP18.54■□□□□ 0.56
RARA-201ENST00000254066 ADAMTS17Q8TE56 1095 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 PRRT1Q99946 306 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 NMES1Q9C002 83 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 CHMP1AQ9HD42 196 aaPredicted RBP18.54■□□□□ 0.56
RARA-201ENST00000254066 FRRS1LQ9P0K9 344 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 USP36Q9P275 1121 aaKnown RBP18.54■□□□□ 0.56
RARA-201ENST00000254066 IER3IP1Q9Y5U9 82 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 COL4A6Q14031 1691 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 TRAV8-7A0A075B6U6 113 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 A0A0A6YYH2 397 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 MEIS3P1A6NDR6 274 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 A6NJ64 397 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 CCSO14618 274 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 ARPC3O15145 178 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 MAS1P04201 325 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 CPT2P23786 658 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 SOX2P48431 317 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 HGFACQ04756 655 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 DUSP5Q16690 384 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 DPY19L2P2Q6ZN68 376 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 BPIFB2Q8N4F0 458 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 RAB42Q8N4Z0 105 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 OR7G2Q8NG99 324 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 GPR148Q8TDV2 347 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 NAA11Q9BSU3 229 aaPredicted RBP18.54■□□□□ 0.56
RARA-201ENST00000254066 COMMD4Q9H0A8 199 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 HCSTQ9UBK5 93 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 ENTPD2Q9Y5L3 495 aa18.54■□□□□ 0.56
RARA-201ENST00000254066 A0A1W2PPE3 182 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 HSPB2A8KAH6 182 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 SLC17A2O00624 439 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 DOK2O60496 412 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 FBXO24O75426 580 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 CYB5AP00167 134 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 GABRR2P28476 465 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 TACR3P29371 465 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 RBM39Q14498 530 aaKnown RBP18.53■□□□□ 0.56
RARA-201ENST00000254066 HSPB2Q16082 182 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 ASTLQ6HA08 431 aaPredicted RBP18.53■□□□□ 0.56
RARA-201ENST00000254066 OR13C8Q8NGS7 320 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 MICU1Q9BPX6 476 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 SELENOIQ9C0D9 397 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 XKR8Q9H6D3 395 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 RXFP3Q9NSD7 469 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 CACFD1Q9UGQ2 172 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 C9orf170A2RU37 121 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 TMEM212A6NML5 194 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 ZNF736B4DX44 427 aaPredicted RBP18.53■□□□□ 0.56
RARA-201ENST00000254066 PPIHO43447 177 aaKnown RBP18.53■□□□□ 0.56
RARA-201ENST00000254066 GPR1P46091 355 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 CX3CR1P49238 355 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 GATMP50440 423 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 ELOCQ15369 112 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 RAB11BQ15907 218 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 C2orf76Q3KRA6 126 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 FNDC3BQ53EP0 1204 aaKnown RBP18.53■□□□□ 0.56
RARA-201ENST00000254066 SLC16A9Q7RTY1 509 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 DEFB123Q8N688 67 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 MCHR2Q969V1 340 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 FAM3DQ96BQ1 224 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 Q96M85 177 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 ELF4Q99607 663 aaPredicted RBP18.53■□□□□ 0.56
RARA-201ENST00000254066 GGACTQ9BVM4 153 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 FAM96BQ9Y3D0 163 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 OBSL1O75147 1896 aa18.53■□□□□ 0.56
RARA-201ENST00000254066 CPED1A4D0V7 1026 aa18.52■□□□□ 0.56
RARA-201ENST00000254066 DVL1P1P54792 670 aaPredicted RBP18.52■□□□□ 0.56
RARA-201ENST00000254066 OR7A5Q15622 319 aa18.52■□□□□ 0.56
RARA-201ENST00000254066 ARHGAP40Q5TG30 622 aa18.52■□□□□ 0.56
RARA-201ENST00000254066 C16orf54Q6UWD8 224 aa18.52■□□□□ 0.56
RARA-201ENST00000254066 C1QL4Q86Z23 238 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms