RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 PCGF3Q3KNV8 242 aa18.02■□□□□ 0.48
NEDD8-201ENST00000250495 ALKBH6Q3KRA9 238 aa18.02■□□□□ 0.48
NEDD8-201ENST00000250495 C10orf128Q5T292 105 aa18.02■□□□□ 0.48
NEDD8-201ENST00000250495 LRRC18Q8N456 261 aa18.02■□□□□ 0.48
NEDD8-201ENST00000250495 OR51B6Q9H340 312 aa18.02■□□□□ 0.48
NEDD8-201ENST00000250495 NARFLQ9H6Q4 476 aa18.02■□□□□ 0.48
NEDD8-201ENST00000250495 METRNQ9UJH8 293 aa18.02■□□□□ 0.48
NEDD8-201ENST00000250495 MED31Q9Y3C7 131 aa18.02■□□□□ 0.48
NEDD8-201ENST00000250495 BBIP1A8MTZ0 92 aa18.01■□□□□ 0.47
NEDD8-201ENST00000250495 NCR1O76036 304 aa18.01■□□□□ 0.47
NEDD8-201ENST00000250495 MMP7P09237 267 aaPredicted RBP18.01■□□□□ 0.47
NEDD8-201ENST00000250495 TSPAN19P0C672 248 aa18.01■□□□□ 0.47
NEDD8-201ENST00000250495 NR2C1P13056 603 aa18.01■□□□□ 0.47
NEDD8-201ENST00000250495 TNFRSF1BP20333 461 aa18.01■□□□□ 0.47
NEDD8-201ENST00000250495 MRPS34P82930 218 aaKnown RBP18.01■□□□□ 0.47
NEDD8-201ENST00000250495 MAPRE2Q15555 327 aa18.01■□□□□ 0.47
NEDD8-201ENST00000250495 CPLX4Q7Z7G2 160 aa18.01■□□□□ 0.47
NEDD8-201ENST00000250495 TMEM186Q96B77 213 aa18.01■□□□□ 0.47
NEDD8-201ENST00000250495 ZNF583Q96ND8 569 aa18.01■□□□□ 0.47
NEDD8-201ENST00000250495 SMURF2Q9HAU4 748 aa18.01■□□□□ 0.47
NEDD8-201ENST00000250495 C20orf141Q9NUB4 165 aa18.01■□□□□ 0.47
NEDD8-201ENST00000250495 NKIRAS2Q9NYR9 191 aa18.01■□□□□ 0.47
NEDD8-201ENST00000250495 GRIP1Q9Y3R0 1128 aa18.01■□□□□ 0.47
NEDD8-201ENST00000250495 HTR3EA5X5Y0 456 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 NPIPB13A6NJU9 1138 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 NPIPB4C9JG80 1138 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 FXYD1O00168 92 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 MRASO14807 208 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 MT-ND5P03915 603 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 TROVE2P10155 538 aaKnown RBP eCLIP18■□□□□ 0.47
NEDD8-201ENST00000250495 IFNA8P32881 189 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 MAGEB1P43366 347 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 OR1E2P47887 323 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 TEKQ02763 1124 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 LAPTM4AQ15012 233 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 ARMC4Q5T2S8 1044 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 RINLQ6ZS11 566 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 PCYOX1LQ8NBM8 494 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 ICA1LQ8NDH6 482 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 MOSPD2Q8NHP6 518 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 C10orf82Q8WW14 230 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 TXNIPQ9H3M7 391 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 CCNB1IP1Q9NPC3 277 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 HIF1ANQ9NWT6 349 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 GID8Q9NWU2 228 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 TREM2Q9NZC2 230 aa18■□□□□ 0.47
NEDD8-201ENST00000250495 FAM157AC9JC47 383 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 RP2O75695 350 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 MSMBP08118 114 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 GAAP10253 952 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 ANPEPP15144 967 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 CCNOP22674 350 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 KDELR2P33947 212 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 CRYBB2P43320 205 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 ARFIP2P53365 341 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 ERVS71-1P61550 626 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 CCL8P80075 99 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 ST3GAL3Q11203 375 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 KLF10Q13118 480 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 TAF11Q15544 211 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 CYBRD1Q53TN4 286 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 PABPC1L2AQ5JQF8 200 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 UNQ6126/PRO20091Q6UXV3 157 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 OR1J1Q8NGS3 322 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 OR51F2Q8NH61 342 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 TSPAN32Q96QS1 320 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 RBP7Q96R05 134 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 DECR2Q9NUI1 292 aa17.99■□□□□ 0.47
NEDD8-201ENST00000250495 EIF3KQ9UBQ5 218 aaKnown RBP17.99■□□□□ 0.47
NEDD8-201ENST00000250495 WNT9BO14905 357 aa17.98■□□□□ 0.47
NEDD8-201ENST00000250495 CDC14BO60729 498 aa17.98■□□□□ 0.47
NEDD8-201ENST00000250495 SLC2A10O95528 541 aa17.98■□□□□ 0.47
NEDD8-201ENST00000250495 STOMP27105 288 aa17.98■□□□□ 0.47
NEDD8-201ENST00000250495 LMO4P61968 165 aa17.98■□□□□ 0.47
NEDD8-201ENST00000250495 CD47Q08722 323 aa17.98■□□□□ 0.47
NEDD8-201ENST00000250495 SCGB2A2Q13296 93 aa17.98■□□□□ 0.47
NEDD8-201ENST00000250495 SGCAQ16586 387 aa17.98■□□□□ 0.47
NEDD8-201ENST00000250495 ALG10Q5BKT4 473 aa17.98■□□□□ 0.47
NEDD8-201ENST00000250495 PIGWQ7Z7B1 504 aa17.98■□□□□ 0.47
NEDD8-201ENST00000250495 CPEB3Q8NE35 698 aaKnown RBP17.98■□□□□ 0.47
NEDD8-201ENST00000250495 FNDC8Q8TC99 324 aa17.98■□□□□ 0.47
NEDD8-201ENST00000250495 HDAC2Q92769 488 aaKnown RBP17.98■□□□□ 0.47
NEDD8-201ENST00000250495 LPAR2Q9HBW0 351 aa17.98■□□□□ 0.47
NEDD8-201ENST00000250495 HIF3AQ9Y2N7 669 aa17.98■□□□□ 0.47
NEDD8-201ENST00000250495 LOC100653049A0A140TA62 436 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 HAX1O00165 279 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 TPD52L2O43399 206 aaKnown RBP17.97■□□□□ 0.47
NEDD8-201ENST00000250495 KRT34O76011 436 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 IGHV3-13P01766 116 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 ZNF32P17041 273 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 CDAP32320 146 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 GUCA1AP43080 201 aaPredicted RBP17.97■□□□□ 0.47
NEDD8-201ENST00000250495 SELENOWP63302 87 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 ZNF718Q3SXZ3 478 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 LRRC23Q53EV4 343 aaPredicted RBP17.97■□□□□ 0.47
NEDD8-201ENST00000250495 THEM4Q5T1C6 240 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 SLC25A47Q6Q0C1 308 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 C1orf174Q8IYL3 243 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 NSMAFQ92636 917 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 NABP1Q96AH0 204 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms