RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 RADILQ96JH8 1075 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 LCORQ96JN0 433 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-201ENST00000249837 C19orf43Q9BQ61 176 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 BANF2Q9H503 90 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF442Q9H7R0 627 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 APMAPQ9HDC9 416 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SLC7A11Q9UPY5 501 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SIGLEC7Q9Y286 467 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 TMED7-TICAM2A0A0A6YYA0 188 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 G3V3Y1 287 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 CD3DP04234 171 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 CBR1P16152 277 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 IL13RA1P78552 427 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF79Q15937 498 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SLC35D3Q5M8T2 416 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF704Q6ZNC4 412 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-201ENST00000249837 LIX1LQ8IVB5 337 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 OR10R2Q8NGX6 335 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 CMBLQ96DG6 245 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 MS4A7Q9GZW8 240 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF160Q9HCG1 818 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 TMED7Q9Y3B3 224 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 TRAV36DV7A0A075B6V5 113 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 IGHV3-20A0A0C4DH32 117 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 VSTM2BA6NLU5 285 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SDCBPO00560 298 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-201ENST00000249837 RAB5BP61020 215 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 DYRK1AQ13627 763 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SGCBQ16585 318 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 TMEM176BQ3YBM2 270 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-201ENST00000249837 OR5L2Q8NGL0 311 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 OR5M1Q8NGP8 315 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 FNDC9Q8TBE3 224 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 FAM174AQ8TBP5 190 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SCGB1C1Q8TD33 95 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 MAFIPQ8WZ33 124 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 CRB3Q9BUF7 120 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 POLE3Q9NRF9 147 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 HIF3AQ9Y2N7 669 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 RGS13O14921 159 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 CFIP05156 583 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 POU3F3P20264 500 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-201ENST00000249837 GSG1Q2KHT4 349 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 COMTD1Q86VU5 262 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 OR1J4Q8NGS1 313 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 PTP4A1Q93096 173 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 PPP1R3EQ9H7J1 279 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 PCNX3Q9H6A9 2034 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 NLRC5Q86WI3 1866 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 TRAV1-2A0A0B4J238 106 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 A0A0D9SG52 128 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 OR6C68A6NDL8 312 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 PRAMEF26H0Y7S4 382 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 MMP15P51511 669 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 DUSP8Q13202 625 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 LINC00303Q3SY05 128 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 Q6ZTK2 550 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 ANKRD33Q7Z3H0 272 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF679Q8IYX0 411 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 NUDCD2Q8WVJ2 157 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 LRRC46Q96FV0 321 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 LINC00615Q96LM1 132 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SLC6A18Q96N87 628 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SPACA5Q96QH8 159 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 PTGES2Q9H7Z7 377 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 KLK11Q9UBX7 282 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SLC22A7Q9Y694 548 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 WDPCPO95876 746 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 CD53P19397 219 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 GABRR1P24046 479 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 POLR2HP52434 150 aaKnown RBP4.21□□□□□ -1.74
VPS13C-201ENST00000249837 OR2W3Q7Z3T1 314 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 OR5D14Q8NGL3 314 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 ADGRL4Q9HBW9 690 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 CUTCQ9NTM9 273 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 POMT2Q9UKY4 750 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 LEUTXA8MZ59 168 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 DUX1O43812 170 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 CRYBA2P53672 197 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 BIDP55957 195 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 MESP2Q0VG99 397 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 PMPCAQ10713 525 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 BATF2Q8N1L9 274 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 OR4K15Q8NH41 348 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SCARB1Q8WTV0 552 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 TEX101Q9BY14 249 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 MOKQ9UQ07 419 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 PCYT1BQ9Y5K3 369 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-201ENST00000249837 OR2T1O43869 369 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 PMS2P2O95744 297 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 SNRNP70P08621 437 aaKnown RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 PPT1P50897 306 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 OR1D5P58170 312 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 SLC36A2Q495M3 483 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TMEM88Q6PEY1 159 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 NT5CQ8TCD5 201 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 MIB2Q96AX9 1013 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 RAB3CQ96E17 227 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 LMAN1LQ9HAT1 526 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 RAB22AQ9UL26 194 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms