RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 PRAF2O60831 178 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 OR2G3Q8NGZ4 309 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 WNT1P04628 370 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 ACSM4P0C7M7 580 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 TGM1P22735 817 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 NPBWR1P48145 328 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 Q6ZSR6 202 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 COMMD1Q8N668 190 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 OR1S2Q8NGQ3 325 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 H0YGG7 62 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 INHBEP58166 350 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 YBX1P67809 324 aaKnown RBP6.91□□□□□ -1.3
RIF1-201ENST00000243326 SRSF5Q13243 272 aaKnown RBP6.91□□□□□ -1.3
RIF1-201ENST00000243326 CASD1Q96PB1 797 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 ADAM19Q9H013 955 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 SSSCA1O60232 199 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 ONECUT2O95948 504 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 MRPL19P49406 292 aaKnown RBP6.91□□□□□ -1.3
RIF1-201ENST00000243326 SIGIRRQ6IA17 410 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 GLIPR1L1Q6UWM5 242 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 CBLCQ9ULV8 474 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 DRGXA6NNA5 263 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 PLPP1O14494 284 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 HS3ST1O14792 307 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 HIST1H1CP16403 213 aaKnown RBP6.91□□□□□ -1.3
RIF1-201ENST00000243326 BRICD5Q6PL45 260 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 PPP1R3CQ9UQK1 317 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 GLTPD2A6NH11 291 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 TOX4O94842 621 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 PMP22Q01453 160 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 SLC16A12Q6ZSM3 486 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 TMEM104Q8NE00 496 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 OR51H1Q8NH63 302 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 NAA11Q9BSU3 229 aaPredicted RBP6.91□□□□□ -1.3
RIF1-201ENST00000243326 SEMA6CQ9H3T2 930 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 CLCF1Q9UBD9 225 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 RCL1Q9Y2P8 373 aaKnown RBP6.91□□□□□ -1.3
RIF1-201ENST00000243326 COA3Q9Y2R0 106 aaPredicted RBP6.91□□□□□ -1.3
RIF1-201ENST00000243326 CPN1P15169 458 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 PKDCCQ504Y2 493 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 OR8D4Q8NGM9 314 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 ZDHHC12Q96GR4 267 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 AGAP14A8MT82 685 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 A8MXE2 369 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 SLC16A6O15403 523 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 FABP1P07148 127 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 MDKP21741 143 aaPredicted RBP6.91□□□□□ -1.3
RIF1-201ENST00000243326 HTR2CP28335 458 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 HOXD9P28356 352 aaPredicted RBP6.91□□□□□ -1.3
RIF1-201ENST00000243326 UBE2NP61088 152 aaKnown RBP6.91□□□□□ -1.3
RIF1-201ENST00000243326 TAZQ16635 292 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 TXN2Q99757 166 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 GPR55Q9Y2T6 319 aaPredicted RBP6.91□□□□□ -1.3
RIF1-201ENST00000243326 ADAM10O14672 748 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 THBS2P35442 1172 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 KRTDAPP60985 99 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 CTBSQ01459 385 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 TEX261Q6UWH6 196 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 SLC16A11Q8NCK7 471 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 SLC7A13Q8TCU3 470 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 OR52A5Q9H2C5 316 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 C11orf49Q9H6J7 331 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 EXO1Q9UQ84 846 aaKnown RBP6.91□□□□□ -1.3
RIF1-201ENST00000243326 U3KQ87 197 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 HMGN4O00479 90 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 MFSD4AQ8N468 514 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 DHRS9Q9BPW9 319 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 KLK11Q9UBX7 282 aa6.91□□□□□ -1.3
RIF1-201ENST00000243326 SEMA4FO95754 770 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 DUSP5Q16690 384 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 TMEM176BQ3YBM2 270 aaPredicted RBP6.9□□□□□ -1.3
RIF1-201ENST00000243326 CHTF18Q8WVB6 975 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 DIMT1Q9UNQ2 313 aaKnown RBP6.9□□□□□ -1.3
RIF1-201ENST00000243326 CAMK2AQ9UQM7 478 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 F12P00748 615 aaPredicted RBP6.9□□□□□ -1.3
RIF1-201ENST00000243326 UBE2G2P60604 165 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 SLC51BQ86UW2 128 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 MARCH1Q8TCQ1 289 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 ISOC2Q96AB3 205 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 FAM173AQ9BQD7 235 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 MUC4Q99102 2169 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 PHYHO14832 338 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 SLC31A2O15432 143 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 LRP3O75074 770 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 KLKB1P03952 638 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 CDKN3Q16667 212 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 SERINC5Q86VE9 423 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 KLHDC8BQ8IXV7 354 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 GMLQ99445 158 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 EXOSC3Q9NQT5 275 aaKnown RBP6.9□□□□□ -1.3
RIF1-201ENST00000243326 ZNF74Q16587 644 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 SGK3Q96BR1 496 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 TMEM59Q9BXS4 323 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 SRPK3Q9UPE1 567 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 NRXN3Q9Y4C0 1643 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 PPP1R2P9O14990 202 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 PPM1DO15297 605 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 AKR7A3O95154 331 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 CNR1P21554 472 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 ID4P47928 161 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms