RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 DNM1P34Q6PK57 102 aa20.66■□□□□ 0.9
HOMER3-201ENST00000221222 KLHL24Q6TFL4 600 aa20.66■□□□□ 0.9
HOMER3-201ENST00000221222 SEZ6L2Q6UXD5 910 aa20.66■□□□□ 0.9
HOMER3-201ENST00000221222 SLC22A24Q8N4F4 322 aa20.66■□□□□ 0.9
HOMER3-201ENST00000221222 OR52N5Q8NH56 324 aa20.66■□□□□ 0.9
HOMER3-201ENST00000221222 RNPEPL1Q9HAU8 725 aa20.66■□□□□ 0.9
HOMER3-201ENST00000221222 RPRD1BQ9NQG5 326 aaKnown RBP20.66■□□□□ 0.9
HOMER3-201ENST00000221222 DCTN6O00399 190 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 SURF4O15260 269 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 KHDRBS3O75525 346 aaKnown RBP20.65■□□□□ 0.9
HOMER3-201ENST00000221222 OR8G3PP0DMU2 310 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 ZNF3P17036 446 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 NPR2P20594 1047 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 CRYGSP22914 178 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 PAX7P23759 505 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 UBE2NP61088 152 aaKnown RBP20.65■□□□□ 0.9
HOMER3-201ENST00000221222 CRMP1Q14194 572 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 ETFDHQ16134 617 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 SLX4IPQ5VYV7 408 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 ZBTB46Q86UZ6 589 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 OR6V1Q8N148 313 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 NABP1Q96AH0 204 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 ZC3HAV1LQ96H79 300 aaKnown RBP20.65■□□□□ 0.9
HOMER3-201ENST00000221222 TEP1Q99973 2627 aaKnown RBP20.65■□□□□ 0.9
HOMER3-201ENST00000221222 RACGAP1Q9H0H5 632 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 SIAEQ9HAT2 523 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 C8orf4Q9NR00 106 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 NKX1-2Q9UD57 310 aaPredicted RBP20.65■□□□□ 0.9
HOMER3-201ENST00000221222 B9D1Q9UPM9 204 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 FKBP7Q9Y680 259 aa20.65■□□□□ 0.9
HOMER3-201ENST00000221222 IGLV1-36A0A0B4J1U3 117 aa20.64■□□□□ 0.89
HOMER3-201ENST00000221222 CASKO14936 926 aa20.64■□□□□ 0.89
HOMER3-201ENST00000221222 WNT11O96014 354 aa20.64■□□□□ 0.89
HOMER3-201ENST00000221222 PEX2P28328 305 aa20.64■□□□□ 0.89
HOMER3-201ENST00000221222 CDAP32320 146 aa20.64■□□□□ 0.89
HOMER3-201ENST00000221222 POLR2IP36954 125 aaKnown RBP20.64■□□□□ 0.89
HOMER3-201ENST00000221222 DAZAP2Q15038 168 aaPredicted RBP20.64■□□□□ 0.89
HOMER3-201ENST00000221222 CYB561A3Q8NBI2 242 aa20.64■□□□□ 0.89
HOMER3-201ENST00000221222 TSSK2Q96PF2 358 aa20.64■□□□□ 0.89
HOMER3-201ENST00000221222 NMNAT2Q9BZQ4 307 aa20.64■□□□□ 0.89
HOMER3-201ENST00000221222 RIBC2Q9H4K1 309 aa20.64■□□□□ 0.89
HOMER3-201ENST00000221222 A0A1W2PR80 420 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 FARS2O95363 451 aaKnown RBP20.63■□□□□ 0.89
HOMER3-201ENST00000221222 SLC25A1P53007 311 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 SLC34A1Q06495 639 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 RIPK1Q13546 671 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 OGFRL1Q5TC84 451 aaPredicted RBP20.63■□□□□ 0.89
HOMER3-201ENST00000221222 LPCAT4Q643R3 524 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 C12orf73Q69YU5 71 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 WFDC8Q8IUA0 241 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 SKA3Q8IX90 412 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 PACRGLQ8N7B6 248 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 SLC38A2Q96QD8 506 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 PRRG3Q9BZD7 231 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 FN3KQ9H479 309 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 SRA1Q9HD15 236 aaKnown RBP20.63■□□□□ 0.89
HOMER3-201ENST00000221222 ZNF224Q9NZL3 707 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 DCHS2Q6V1P9 2916 aa20.63■□□□□ 0.89
HOMER3-201ENST00000221222 A0A1W2PPL8 197 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 E9PQ18 207 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 GOSR1O95249 250 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 LAP3P28838 519 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 GUCA1AP43080 201 aaPredicted RBP20.62■□□□□ 0.89
HOMER3-201ENST00000221222 LRRC36Q1X8D7 754 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 FAM27BQ5VT28 67 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 DPPA2Q7Z7J5 298 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 GLB1L2Q8IW92 636 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 OR2T4Q8NH00 348 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 HTRA1Q92743 480 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 GRIP2Q9C0E4 1043 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 RERGLQ9H628 205 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 SEC61A2Q9H9S3 476 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 MOV10Q9HCE1 1003 aaKnown RBP20.62■□□□□ 0.89
HOMER3-201ENST00000221222 NGBQ9NPG2 151 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 POLE4Q9NR33 117 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 B3GNT2Q9NY97 397 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 COA3Q9Y2R0 106 aaPredicted RBP20.62■□□□□ 0.89
HOMER3-201ENST00000221222 PDZD2O15018 2839 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 POLQO75417 2590 aa20.62■□□□□ 0.89
HOMER3-201ENST00000221222 ZNF503-AS2A6NEH8 195 aa20.61■□□□□ 0.89
HOMER3-201ENST00000221222 SGCAQ16586 387 aa20.61■□□□□ 0.89
HOMER3-201ENST00000221222 FAM169BQ8N8A8 192 aa20.61■□□□□ 0.89
HOMER3-201ENST00000221222 NANOS1Q8WY41 292 aaKnown RBP20.61■□□□□ 0.89
HOMER3-201ENST00000221222 PLEKHA8Q96JA3 519 aa20.61■□□□□ 0.89
HOMER3-201ENST00000221222 RDH12Q96NR8 316 aa20.61■□□□□ 0.89
HOMER3-201ENST00000221222 SH3GL3Q99963 347 aa20.61■□□□□ 0.89
HOMER3-201ENST00000221222 TOR3AQ9H497 397 aa20.61■□□□□ 0.89
HOMER3-201ENST00000221222 TVP23BQ9NYZ1 205 aa20.61■□□□□ 0.89
HOMER3-201ENST00000221222 NPAP1Q9NZP6 1156 aa20.61■□□□□ 0.89
HOMER3-201ENST00000221222 RRP15Q9Y3B9 282 aaKnown RBP20.61■□□□□ 0.89
HOMER3-201ENST00000221222 GAAP10253 952 aa20.6■□□□□ 0.89
HOMER3-201ENST00000221222 MSR1P21757 451 aa20.6■□□□□ 0.89
HOMER3-201ENST00000221222 PAICSP22234 425 aaKnown RBP20.6■□□□□ 0.89
HOMER3-201ENST00000221222 TUBA1BP68363 451 aa20.6■□□□□ 0.89
HOMER3-201ENST00000221222 TUBA4AP68366 448 aa20.6■□□□□ 0.89
HOMER3-201ENST00000221222 EFNB1P98172 346 aa20.6■□□□□ 0.89
HOMER3-201ENST00000221222 GLO1Q04760 184 aa20.6■□□□□ 0.89
HOMER3-201ENST00000221222 SNAPC1Q16533 368 aa20.6■□□□□ 0.89
HOMER3-201ENST00000221222 KCNMB1Q16558 191 aa20.6■□□□□ 0.89
HOMER3-201ENST00000221222 TUBA1AQ71U36 451 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms