RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 B4GALT7Q9UBV7 327 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 KLHDC2Q9Y2U9 406 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CMAHPQ9Y471 501 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 NCOA6Q14686 2063 aaPredicted RBP17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 TRDV1A0A1B0GX56 115 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 DCDC2BA2VCK2 349 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GFRA3O60609 400 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ZNF43P17038 809 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CAPZA2P47755 286 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 HSF2Q03933 536 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GPR50Q13585 617 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SLC25A25Q6KCM7 469 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 HAS2Q92819 552 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 PELI1Q96FA3 418 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 TMED9Q9BVK6 235 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 MFRPQ9BY79 579 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 MRPL13Q9BYD1 178 aaKnown RBP17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ABCB9Q9NP78 766 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 MRPL22Q9NWU5 206 aaKnown RBP17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 KLF13Q9Y2Y9 288 aaPredicted RBP17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 HLA-DQA2P01906 255 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 PSKH1P11801 424 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GLO1Q04760 184 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 INSL4Q14641 139 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 RSPO4Q2I0M5 234 aaPredicted RBP17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 OTPQ5XKR4 325 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 UCN2Q96RP3 112 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SRXN1Q9BYN0 137 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ACOXLQ9NUZ1 547 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 KLHL13Q9P2N7 655 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 TBC1D24Q9ULP9 559 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GRIP1Q9Y3R0 1128 aa17.55■□□□□ 0.4
TNFRSF1A-201ENST00000162749 IGHV3-15A0A0B4J1V0 119 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 IGKV1D-43A0A0B4J1Z2 117 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 EIF1AYO14602 144 aaKnown RBP17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SSX4O60224 188 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 HPNP05981 417 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CELA3AP09093 270 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CENPAP49450 140 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 STARP49675 285 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CCL11P51671 97 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 BLVRAP53004 296 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 TAS2R43P59537 309 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ARG2P78540 354 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ZNF684Q5T5D7 378 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 UBQLNLQ8IYU4 475 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 FDCSPQ8NFU4 85 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ITPKCQ96DU7 683 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GNG8Q9UK08 70 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 RASD1Q9Y272 281 aa17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 COA3Q9Y2R0 106 aaPredicted RBP17.54■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SHISA3A0PJX4 238 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 PSMD9O00233 223 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 PLPP2O43688 288 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 PGA4P0DJD7 388 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 PGA3P0DJD8 388 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 MAGEA5P43359 124 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SUCLG1P53597 346 aaKnown RBP17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CAV3P56539 151 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 RAC3P60763 192 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CAMK2DQ13557 499 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 BAK1Q16611 211 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ESPNLQ6ZVH7 1005 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SLC25A44Q96H78 314 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ADGRG7Q96K78 797 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 HDHD5Q9BXW7 423 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SRRQ9GZT4 340 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 KLK13Q9UKR3 277 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GSTK1Q9Y2Q3 226 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ZNF891A8MT65 544 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 FAM166BA8MTA8 275 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 DNPH1O43598 174 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CD46P15529 392 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ALOX5APP20292 161 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ENPP1P22413 925 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 AGFG1P52594 562 aaKnown RBP17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CLDN15P56746 228 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CCBE1Q6UXH8 406 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 OTOSQ8NHW6 89 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.53■□□□□ 0.46e-7■■■□□ 14.9
TNFRSF1A-201ENST00000162749 LAMP5Q9UJQ1 280 aa17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ING1Q9UK53 422 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-201ENST00000162749 TNRC6AQ8NDV7 1962 aaKnown RBP17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 KLRC4-KLRK1H3BQV0 150 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GLSO94925 669 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 VAMP5O95183 116 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 HLA-DPB1P04440 258 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 POU3F2P20265 443 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 MEOX1P50221 254 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 DMKNQ6E0U4 476 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 DNM1P34Q6PK57 102 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ARL9Q6T311 187 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 OR8H2Q8N162 312 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 TMEM251Q8N6I4 163 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 OR6X1Q8NH79 312 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 HPS1Q92902 700 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 MRPL48Q96GC5 212 aaKnown RBP17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 PGLYRP3Q96LB9 341 aa17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ADAD1Q96M93 576 aaKnown RBP17.52■□□□□ 0.4
TNFRSF1A-201ENST00000162749 MNTQ99583 582 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms