RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Clec3bP43025 202 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 DmknQ6P253 517 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr1100Q8VFM1 321 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 St3gal6Q8VIB3 329 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Scgb3a2Q920H1 91 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Lcn8Q924P3 175 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 CsprsQ99388 208 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ndufa6Q9CQZ5 131 aaKnown RBP9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Elovl7Q9D2Y9 281 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Btnl10Q9JK39 275 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tas2r103Q9JKA3 312 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Rpl7a-ps5A0A140T8L3 268 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Dgat2l6A2ADU8 337 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Slc10a1O08705 362 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tmem38aQ3TMP8 298 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gstm7Q80W21 218 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Lix1lQ8BQ89 337 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 4930451G09RikQ8C5G4 195 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr658Q8VGV5 323 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Rtl8bQ9D1F0 113 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Phrf1A6H619 1682 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr601A2RS33 314 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Amy2a1E9PV85 245 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Vmn1r176G3UW31 304 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Prph2P15499 346 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ptpn6P29351 595 aaKnown RBP9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Defb14Q7TNV9 67 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cpeb2Q812E0 521 aaKnown RBP9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 SuoxQ8R086 546 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr883Q8VF64 309 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ubox5Q925F4 539 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Emc7Q9EP72 241 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Plek2Q9WV52 353 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 LipgQ9WVG5 500 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Znf551B2RUI1 696 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gm45062E0CZ38 131 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Vmn2r30K7N5W1 852 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Vmn2r47K7N709 852 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 P01670 111 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 P01671 111 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 P01672 111 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 PmchP56942 165 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Vezf1Q5SXC4 518 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tbccd1Q640P7 552 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Vmn1r225Q8R2A5 298 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tubg2Q8VCK3 451 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr448Q8VES9 310 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cdca3Q99M54 266 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cmtm8Q9CZR4 173 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Samt4Q9D4X6 233 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Kcnip1Q9JJ57 227 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 MNCb-2990Q9JJ93 142 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 HraslsQ9QZU4 167 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 SpdefQ9WTP3 325 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 RfxankQ9Z205 269 aa9.42□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Dmrta2A2A9A2 531 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Alx4O35137 399 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Btg4O70552 250 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 RhoP15409 348 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tacr1P30548 407 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 LumP51885 338 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ube2iP63280 158 aaKnown RBP9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Rab33aP97950 237 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Rhox4fQ2MDF8 205 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Rhox4cQ2MDG1 205 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Dhrs9Q58NB6 319 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ugt8Q64676 541 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr429Q7TRW1 312 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr799Q8VGI7 311 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Plpp7Q91WB2 271 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cwh43Q91YL7 699 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 FcrlaQ920A9 352 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ms4a4dQ99N05 225 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Sec13Q9D1M0 322 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Rhox4aQ9D3I8 205 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ndor1A2AI05 598 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Zfp995E9Q6M3 437 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Pcdh12O55134 1180 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Mtco2P00405 227 aaKnown RBP9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tead1P30051 426 aaKnown RBP9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Six5P70178 719 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Epha5Q60629 876 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Pck2Q8BH04 640 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Lkaaear1Q8BIG2 198 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 1810024B03RikQ8BWE1 200 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Slc24a4Q8CGQ8 622 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Sirt5Q8K2C6 310 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Vmn1r231Q8R2A3 311 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr881Q8VF63 314 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr993Q8VF75 314 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Nudt21Q9CQF3 227 aaKnown RBP9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Senp8Q9D2Z4 221 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 ShpkQ9D5J6 476 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 GatmQ9D964 423 aaKnown RBP9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Slc19a1P41438 512 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Thbs2Q03350 1172 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 NnatQ61979 81 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Spin2cQ6NVE3 257 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 NagpaQ8BJ48 517 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 CenpoQ8K015 298 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms