RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Mrpl37Q921S7 423 aaKnown RBP14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Lcn8Q924P3 175 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Trappc2Q9CQP2 140 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Nr4a3Q9QZB6 627 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Ate1Q9Z2A5 516 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 PlpbpQ9Z2Y8 274 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gm21858A0A087WQ24 222 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gm13124A2A752 406 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1314A2AVL6 312 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Susd1E9Q3H4 752 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr520E9Q518 316 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Vmn1r86L7N213 316 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Foxa1P35582 468 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Sox1P53783 391 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Rce1P57791 329 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gpr85P60894 370 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 S100gP97816 79 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Slc35f3Q1LZI2 421 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Fahd2Q3TC72 313 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Them4Q3UUI3 230 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Fbxw22Q5XG67 466 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr374Q7TRY0 313 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tspan10Q8VCF5 331 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 AspnQ99MQ4 373 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Rpl14Q9CR57 217 aaKnown RBP14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 RangrfQ9JIB0 185 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1082A0A1L1SUC9 313 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 ItpkbB2RXC2 942 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ccdc74aE9Q9U8 364 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gm10269G3UWD7 123 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 NfyaP23708 346 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Mmp2P33434 662 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Hrh3P58406 445 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ltc4sQ60860 150 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Eci3Q78JN3 317 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 P4htmQ8BG58 503 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Fbxl2Q8BH16 423 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ablim2Q8BL65 612 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tns4Q8BZ33 696 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1261Q8VFB0 306 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Pno1Q9CPS7 248 aaKnown RBP14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ctrb1Q9CR35 263 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Dph7Q9CYU6 477 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Asb12Q9D738 308 aa14.83□□□□□ -0.04
Trim28-201ENSMUST00000005705 Btbd35f23A0A0R4J2B9 498 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1055A2AVX9 346 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr173E9QAT7 321 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 AanatO88816 205 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Grap2O89100 322 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Camk2aP11798 478 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Slc6a1P31648 599 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Cxcl5P50228 132 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tfb2mQ3TL26 396 aaKnown RBP14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Fbxo31Q3TQF0 507 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gcnt7Q3V3K7 433 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Bbs1Q3V3N7 593 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Znf488Q5HZG9 337 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Eml2Q7TNG5 649 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 LssQ8BLN5 733 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Fem1abQ8C0T1 654 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Frmd6Q8C0V9 622 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Lrp11Q8CB67 483 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Cops7aQ9CZ04 275 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tmem35aQ9D328 167 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Obp1aQ9D3H2 163 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Dcbld1Q9D4J3 503 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 AplfQ9D842 499 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 SclyQ9JLI6 432 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Naa10Q9QY36 235 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Eif3gQ9Z1D1 320 aaKnown RBP14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr727A2RTN7 324 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Gm45062E0CZ38 131 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ptpn21Q62136 1176 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Nudt15Q8BG93 170 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 LipkQ8BM14 398 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Akr7a2Q8CG76 367 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 C1ql3Q9ESN4 255 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 SigirrQ9JLZ8 409 aa14.82□□□□□ -0.04
Trim28-201ENSMUST00000005705 Pcdh17E9PXF0 1157 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Vmn2r69G3XA45 850 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 CdaP56389 146 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 ArsgQ3TYD4 525 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Ankrd53Q3V0J4 497 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Mtcp1Q60945 107 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Krt33bQ61897 404 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Tfap2eQ6VUP9 442 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Rspo4Q8BJ73 228 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Chmp1aQ921W0 196 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Slco1a6Q99J94 670 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Jam3Q9D8B7 310 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Bin3Q9JI08 253 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Yipf7Q9JIM5 254 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Igkv6-29A0A0G2JEI6 115 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Pramef6A2A8M8 474 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Olfr1193A2AV13 318 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Xlr4aA2BI40 215 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Mcpt9O35164 246 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 LcatP16301 438 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 4933415F23RikQ14BX6 153 aa14.81□□□□□ -0.04
Trim28-201ENSMUST00000005705 Xlr4cQ3TKR2 215 aa14.81□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms