RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Nrip3Q9JJR9 240 aa13.12□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Pde7bQ9QXQ1 446 aa13.12□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Gpc6Q9R087 555 aa13.12□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Igkv19-93A0A0G2JFZ3 115 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 SmoktcrA2KF29 484 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Wdfy1E9Q4P1 410 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 9330182O14RikJ3QNB2 140 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn2r60L7N2A1 853 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Alx3O70137 343 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Pdlim3O70209 316 aaKnown RBP13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Foxl2O88470 375 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Igf2P09535 180 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Fabp3P11404 133 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Hsd11b2P51661 386 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Rpl27P61358 136 aaKnown RBP13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Rps3aP97351 264 aaKnown RBP13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Klhl21Q3U410 597 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Laptm4aQ60961 233 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Snap91Q61548 901 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Ptp4a1Q63739 173 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Npepl1Q6NSR8 524 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Znf8Q8BGV5 572 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 ShfQ8CG80 238 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Nmral1Q8K2T1 309 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Cbx7Q8VDS3 158 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Olfr186Q8VEX5 309 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Olfr215Q8VF82 310 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Dcp1aQ91YD3 602 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Cisd2Q9CQB5 135 aaKnown RBP13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Utp23Q9CX11 249 aaKnown RBP13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Sesn3Q9CYP7 492 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Wdr89Q9D0R9 386 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Mrpl21Q9D1N9 209 aaKnown RBP13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 PlgrktQ9D3P8 147 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Izumo2Q9DA16 220 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Asf1bQ9DAP7 202 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Zfpl1Q9DB43 310 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Isyna1Q9JHU9 557 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 FetubQ9QXC1 388 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Zfp292Q9Z2U2 2698 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Arfgef3Q3UGY8 2170 aa13.11□□□□□ -0.31
Ercc1-201ENSMUST00000003645 TprF6ZDS4 2431 aaKnown RBP13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 IghdA0A0A6YW14 291 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Sdccag3A2AIW0 432 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Gm13102A2ASJ3 519 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Trabd2bB1ATG9 517 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Olfr294F7CWV4 335 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 GzmmO08643 264 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 CrygsO35486 178 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Erp29P57759 262 aaKnown RBP13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Tuba1cP68373 449 aaKnown RBP13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Hdac2P70288 488 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Crmp1P97427 572 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 C1rlQ3UZ09 482 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Gm732Q3V0P9 516 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Spag8Q3V0Q6 470 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Slc26a10Q5EBI0 492 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Olfr1222Q7TR02 311 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Pck2Q8BH04 640 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 TiprlQ8BH58 271 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Hspa13Q8BM72 471 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Lrfn5Q8BXA0 719 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Angptl8Q8R1L8 198 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Slc6a8Q8VBW1 640 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Sf3b5Q923D4 86 aaKnown RBP13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Dusp22Q99N11 184 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Chmp1b2Q9CQD4 199 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Ier3ip1Q9CR20 82 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Prr23a3Q9CWP9 254 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Snapc3Q9D2C9 407 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Rtl8cQ9D6I0 112 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Rarres2Q9DD06 162 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Skp2Q9Z0Z3 424 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Oasl2Q9Z2F2 508 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Kcnk7Q9Z2T1 307 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Spta1P08032 2415 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Itpr1P11881 2749 aa13.1□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Igkv9-124A0A0G2JDR3 117 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Zfp988F6VKC7 633 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Fbxw25F7C9P2 466 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Zfp989H3BLB0 661 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Gm21411J3KMS0 136 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Shisa8J3QNX5 399 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn2r29L7N2D4 852 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 P2rx6O54803 389 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Tp63O88898 680 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Zfp28P10078 825 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Camk2aP11798 478 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Efna2P52801 209 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Sox3P53784 375 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Smim24Q0VG18 120 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Zfp987Q32P14 633 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Mylk4Q5SUV5 386 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 PmelQ60696 626 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Olfr9Q60885 312 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Acvr1bQ61271 505 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Angptl1Q640P2 490 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Pptc7Q6NVE9 310 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Snrnp40Q6PE01 358 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Zfp866Q6PGD2 520 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms