RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 TRPV1Q8NER1 839 aa3.22□□□□□ -1.89
RTTN-217ENST00000640393 SHC3Q92529 594 aa3.22□□□□□ -1.89
RTTN-217ENST00000640393 FRZBQ92765 325 aa3.22□□□□□ -1.89
RTTN-217ENST00000640393 OR2A5Q96R48 311 aa3.22□□□□□ -1.89
RTTN-217ENST00000640393 ZNF430Q9H8G1 570 aaPredicted RBP3.22□□□□□ -1.89
RTTN-217ENST00000640393 SUN2Q9UH99 717 aa3.22□□□□□ -1.89
RTTN-217ENST00000640393 PEX16Q9Y5Y5 336 aa3.22□□□□□ -1.89
RTTN-217ENST00000640393 CARMIL3Q8ND23 1372 aa3.22□□□□□ -1.89
RTTN-217ENST00000640393 IGHV5-51A0A0C4DH38 117 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 H0YHG0 523 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 SERPINB5P36952 375 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 CDKN2BP42772 138 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 YAP1P46937 504 aaKnown RBP3.21□□□□□ -1.9
RTTN-217ENST00000640393 NUTF2P61970 127 aaKnown RBP3.21□□□□□ -1.9
RTTN-217ENST00000640393 POU2AF1Q16633 256 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 PP632Q6XCG6 107 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 OAFQ86UD1 273 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 NBPF5PQ86XG9 351 aaPredicted RBP3.21□□□□□ -1.9
RTTN-217ENST00000640393 STPG2Q8N412 459 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 ZNF606Q8WXB4 792 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 FAM3DQ96BQ1 224 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 ZBTB18Q99592 522 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 SH3GL1Q99961 368 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 KCTD14Q9BQ13 255 aaPredicted RBP3.21□□□□□ -1.9
RTTN-217ENST00000640393 TCHPQ9BT92 498 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 GCOM2Q9BZD3 368 aaPredicted RBP3.21□□□□□ -1.9
RTTN-217ENST00000640393 HYPKQ9NX55 129 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 IKBKGQ9Y6K9 419 aa3.21□□□□□ -1.9
RTTN-217ENST00000640393 SYNJ2BP-COX16A0A087WUM0 186 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 A0A1W2PPV9 198 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 UTS2O95399 124 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 TPM2P07951 284 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 GNAO1P09471 354 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 ZNF286BP0CG31 522 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 MX1P20591 662 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 IFNA8P32881 189 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 VHLP40337 213 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 GINS1Q14691 196 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 TGFBIQ15582 683 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 C6orf226Q5I0X4 101 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 ABHD13Q7L211 337 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 PDXPQ96GD0 296 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 WFIKKN1Q96NZ8 548 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 P2RX4Q99571 388 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 NT5MQ9NPB1 228 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 KCNJ16Q9NPI9 418 aa3.2□□□□□ -1.9
RTTN-217ENST00000640393 IGSF9BQ9UPX0 1349 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 GPATCH8Q9UKJ3 1502 aaKnown RBP3.19□□□□□ -1.9
RTTN-217ENST00000640393 BRWD3Q6RI45 1802 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 BICRAQ9NZM4 1560 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 IGHV3-66A0A0C4DH42 116 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 CLRN2A0PK11 232 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 DYNC1I1O14576 645 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 TMEM50AO95807 157 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 ADRA2AP08913 450 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 FOLR1P15328 257 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 NPY1RP25929 384 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 PBLDP30039 288 aaPredicted RBP3.19□□□□□ -1.9
RTTN-217ENST00000640393 CASP14P31944 242 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 HRH1P35367 487 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 CDH4P55283 916 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 ACTG2P63267 376 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 ERCC8Q13216 396 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 SNRNP35Q16560 246 aaKnown RBP3.19□□□□□ -1.9
RTTN-217ENST00000640393 ABCA11PQ4W5N1 156 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 ZNF836Q6ZNA1 936 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 ZNF709Q8N972 641 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 SH3GL3Q99963 347 aa3.19□□□□□ -1.9
RTTN-217ENST00000640393 MRPL37Q9BZE1 423 aaKnown RBP3.19□□□□□ -1.9
RTTN-217ENST00000640393 ATAD2BQ9ULI0 1458 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 A0A0B4J2A0 478 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 A0A1B0GVX0 72 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 SOX15O60248 233 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 CLIC3O95833 236 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 C6orf47O95873 294 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 SERPIND1P05546 499 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 KITLGP21583 273 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 HNRNPH3P31942 346 aaKnown RBP3.18□□□□□ -1.9
RTTN-217ENST00000640393 CEACAM6P40199 344 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 CSNK1A1P48729 337 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 KCNJ2P63252 427 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 BST1Q10588 318 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 LY6EQ16553 131 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 PTPN20Q4JDL3 420 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 XKR4Q5GH76 650 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 RIMKLAQ8IXN7 391 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 EID2Q8N6I1 236 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 OR2L3Q8NG85 312 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 OR10G4Q8NGN3 311 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 KLHL28Q9NXS3 571 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 SHPKQ9UHJ6 478 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 IKZF2Q9UKS7 526 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 HPCAL4Q9UM19 191 aa3.18□□□□□ -1.9
RTTN-217ENST00000640393 TUBGCP6Q96RT7 1819 aa3.17□□□□□ -1.9
RTTN-217ENST00000640393 SNX4O95219 450 aa3.17□□□□□ -1.9
RTTN-217ENST00000640393 AIFM1O95831 613 aa3.17□□□□□ -1.9
RTTN-217ENST00000640393 SERPINA3P01011 423 aa3.17□□□□□ -1.9
RTTN-217ENST00000640393 MAS1LP35410 378 aa3.17□□□□□ -1.9
RTTN-217ENST00000640393 YWHAGP61981 247 aaKnown RBP eCLIP3.17□□□□□ -1.9
RTTN-217ENST00000640393 TCP10Q12799 353 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms