RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 CHCHD7Q9BUK0 85 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 WRAP53Q9BUR4 548 aaKnown RBP-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 OSBPL10Q9BXB5 764 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 SPZ1Q9BXG8 430 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 XKR8Q9H6D3 395 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 KIR3DX1Q9H7L2 352 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 METTL7AQ9H8H3 244 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 MCCC2Q9HCC0 563 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 CYP39A1Q9NYL5 469 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 ANAPC7Q9UJX3 599 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 RAD54L2Q9Y4B4 1467 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 MDC1Q14676 2089 aaKnown RBP-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 ATG2BQ96BY7 2078 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 PALLDQ8WX93 1383 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 VWA8A3KMH1 1905 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 TRAV34A0A0B4J273 112 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 CLDN34H7C241 214 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 REM1O75628 298 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 IGHG2P01859 326 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 IGHG4P01861 327 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 ADRB2P07550 413 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 CD28P10747 220 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 AK4P27144 223 aaPredicted RBP-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 SLC6A8P48029 635 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 HSPA2P54652 639 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 CDK5Q00535 292 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 SLC15A2Q16348 729 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 YIF1BQ5BJH7 314 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 TRAT1Q6PIZ9 186 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 VPS36Q86VN1 386 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 EFCAB13Q8IY85 973 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 DCANP1Q8TF63 244 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 TSKUQ8WUA8 353 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 HTR3CQ8WXA8 447 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 PTX4Q96A99 478 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 SGK3Q96BR1 496 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 CXCL16Q9H2A7 254 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 LRRC19Q9H756 370 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 TMEM206Q9H813 350 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 CTNNA3Q9UI47 895 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 DNPEPQ9ULA0 475 aa-1.22□□□□□ -2.6
LMBR1-222ENST00000638959 MUC2Q02817 5179 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 IGKV3-7A0A075B6H7 116 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 IGKV1OR2-108A0A075B7D4 117 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 IGKV1D-13A0A0B4J2D9 117 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 TRDCB7Z8K6 153 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 SH3BP5O60239 455 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 OR7C2O60412 319 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 NDUFA7O95182 113 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 OPN1MWP04001 364 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 OPN1MW2P0DN77 364 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 OPN1MW3P0DN78 364 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 IGKV1-13P0DP09 117 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 PTGFRP43088 359 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 TFCP2Q12800 502 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 IFI44LQ53G44 452 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 OR2G6Q5TZ20 316 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 PLET1Q6UQ28 207 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 HDDC2Q7Z4H3 204 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 C10orf126Q8N4M7 172 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 LKAAEAR1Q8TD35 194 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 TEKT1Q969V4 418 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 ZNF75AQ96N20 296 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 NAP1L3Q99457 506 aaPredicted RBP-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 SLF1Q9BQI6 1058 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 SLC35A5Q9BS91 424 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 PRORYQ9H606 182 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 RPAP3Q9H6T3 665 aaPredicted RBP-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 FN3KRPQ9HA64 309 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 FAM49BQ9NUQ9 324 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 MTRRQ9UBK8 725 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 CSDC2Q9Y534 153 aaKnown RBP-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 MRPS18BQ9Y676 258 aaKnown RBP-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 CCDC7Q96M83 1385 aa-1.23□□□□□ -2.61
LMBR1-222ENST00000638959 DIDO1Q9BTC0 2240 aaKnown RBP-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 IGKV3D-7A0A0C4DH55 119 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 IGKV3OR2-268A0A0C4DH90 116 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 FAM47DPA6NHR8 397 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 CCDC69A6NI79 296 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 LRRC30A6NM36 301 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 GGTLC3B5MD39 225 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 STX7O15400 261 aaKnown RBP-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 PALMO75781 387 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 GFPT2O94808 682 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 RAB3DO95716 219 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 ANXA4P09525 319 aaPredicted RBP-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 PTPN6P29350 595 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 PRMT2P55345 433 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 PKNOX1P55347 436 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 KRT83P78385 493 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 SCN1BQ07699 218 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 HES1Q14469 280 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 LDLRAD2Q5SZI1 272 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 CFAP58Q5T655 872 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 PRAMEF7Q5VXH5 474 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 TMEM179Q6ZVK1 233 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 ZNF767PQ75MW2 155 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 LPCAT2Q7L5N7 544 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 TCF23Q7RTU1 214 aa-1.24□□□□□ -2.61
LMBR1-222ENST00000638959 ANKRD37Q7Z713 158 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms