RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 PLPPR2Q96GM1 343 aa12.5□□□□□ -0.41
CBWD3-217ENST00000621474 ERMAPQ96PL5 475 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-217ENST00000621474 IFT27Q9BW83 186 aa12.5□□□□□ -0.41
CBWD3-217ENST00000621474 SEMA6AQ9H2E6 1030 aa12.5□□□□□ -0.41
CBWD3-217ENST00000621474 CLEC4MQ9H2X3 399 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-217ENST00000621474 NOX3Q9HBY0 568 aa12.5□□□□□ -0.41
CBWD3-217ENST00000621474 TMEM38BQ9NVV0 291 aa12.5□□□□□ -0.41
CBWD3-217ENST00000621474 VSX1Q9NZR4 365 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-217ENST00000621474 AMDHD2Q9Y303 409 aa12.5□□□□□ -0.41
CBWD3-217ENST00000621474 DPRXA6NFQ7 191 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 FCGR1AP12314 374 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 CTLA4P16410 223 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 DAPP51397 102 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 COX10Q12887 443 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 ETFDHQ16134 617 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 SLC36A3Q495N2 470 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 BEX5Q5H9J7 111 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 THEM4Q5T1C6 240 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 NCMAPQ5T1S8 102 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 RPL13AP3Q6NVV1 102 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 ZNF813Q6ZN06 617 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 MYPOPQ86VE0 399 aaPredicted RBP12.49□□□□□ -0.41
CBWD3-217ENST00000621474 TMEM200AQ86VY9 491 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 OR4Q3Q8NH05 313 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 FGFBP3Q8TAT2 258 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 NABP1Q96AH0 204 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 ZNF75AQ96N20 296 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 PKP2Q99959 881 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 TMEM204Q9BSN7 226 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 BDH2Q9BUT1 245 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 C1QTNF6Q9BXI9 259 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 NDEL1Q9GZM8 345 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 SYT4Q9H2B2 425 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 OBP2BQ9NPH6 170 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 B3GNT2Q9NY97 397 aa12.49□□□□□ -0.41
CBWD3-217ENST00000621474 DCTN6O00399 190 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 PLAUP00749 431 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 IGKV3-15P01624 115 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 ANXA8P13928 327 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 CDAP32320 146 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 BSPH1Q075Z2 132 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 ZFP1Q6P2D0 407 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 FOXL2NBQ6ZUU3 175 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 SSX8Q7RTT4 187 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 ADCK1Q86TW2 530 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 CDC20BQ86Y33 519 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 SKA3Q8IX90 412 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 LNX2Q8N448 690 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 SLC22A24Q8N4F4 322 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 NSMAFQ92636 917 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 NRGNQ92686 78 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 NMNAT3Q96T66 252 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 DDOQ99489 341 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 TSSK6Q9BXA6 273 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 PLEKHF2Q9H8W4 249 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 TBC1D23Q9NUY8 699 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 CRNNQ9UBG3 495 aaPredicted RBP12.48□□□□□ -0.41
CBWD3-217ENST00000621474 OAZ3Q9UMX2 235 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 POFUT2Q9Y2G5 429 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 XKRYO14609 159 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 IGLV1-44P01699 117 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 HLA-HP01893 362 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 HOXB1P14653 301 aaPredicted RBP12.48□□□□□ -0.41
CBWD3-217ENST00000621474 ZNF23P17027 643 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 HOXC12P31275 282 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 ZNF83P51522 516 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 MRPS34P82930 218 aaKnown RBP12.48□□□□□ -0.41
CBWD3-217ENST00000621474 SPOCK1Q08629 439 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 NRN1LQ496H8 165 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 SLC35F1Q5T1Q4 408 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 C1QTNF12Q5T7M4 302 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 NPEPL1Q8NDH3 523 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 OR52L1Q8NGH7 329 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 OR4K13Q8NH42 304 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 FNDC8Q8TC99 324 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 CENPNQ96H22 339 aaPredicted RBP12.48□□□□□ -0.41
CBWD3-217ENST00000621474 TSSK2Q96PF2 358 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 RBP7Q96R05 134 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 SH3GL3Q99963 347 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 NUAK2Q9H093 628 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 GABARAPL1Q9H0R8 117 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 SEC61A2Q9H9S3 476 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 S100A14Q9HCY8 104 aa12.48□□□□□ -0.41
CBWD3-217ENST00000621474 OR6C68A6NDL8 312 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 G3V2T6 193 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 IDH3BO43837 385 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 AHCYL1O43865 530 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 SCG5P05408 212 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 CELA3BP08861 270 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 PATE4P0C8F1 98 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 NR2C1P13056 603 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 OSMP13725 252 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 ARHGDIAP52565 204 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 NR1H2P55055 460 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 UBE2NP61088 152 aaKnown RBP12.47□□□□□ -0.41
CBWD3-217ENST00000621474 KDM4DQ6B0I6 523 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 MDP1Q86V88 176 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 HIPK1Q86Z02 1210 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 IQCF1Q8N6M8 205 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 ATG16L2Q8NAA4 619 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms