RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 SVOPLQ8N434 492 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 OR8D4Q8NGM9 314 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 TEX47Q8TBZ9 253 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 PIK3IP1Q96FE7 263 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 C1QTNF6Q9BXI9 259 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 NELFAQ9H3P2 528 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 OBP2BQ9NPH6 170 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 RASSF1Q9NS23 344 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 REV1Q9UBZ9 1251 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 DCHS2Q6V1P9 2916 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 ARPC4-TTLL3A0A0A6YYG9 625 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 DEFB108AA8MXU0 73 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 BHLHE40O14503 412 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 TP53P04637 393 aaPredicted RBP16.25■□□□□ 0.19
CIRBP-245ENST00000621399 POU1F1P28069 291 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 CDKN2AP42771 156 aaKnown RBP16.25■□□□□ 0.19
CIRBP-245ENST00000621399 CAPZA2P47755 286 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 ZNF83P51522 516 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 TUBA1BP68363 451 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 TUBA4AP68366 448 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 SLC35F1Q5T1Q4 408 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 FAHD1Q6P587 224 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 PTCHD4Q6ZW05 846 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 TUBA1AQ71U36 451 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 ZNF627Q7L945 461 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 SLC22A24Q8N4F4 322 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 ICA1LQ8NDH6 482 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 OR2T33Q8NG76 320 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 OR4K13Q8NH42 304 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 DNAJC9Q8WXX5 260 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 TMEM38BQ9NVV0 291 aa16.25■□□□□ 0.19
CIRBP-245ENST00000621399 IGKV1D-43A0A0B4J1Z2 117 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-245ENST00000621399 FAM221AA4D161 298 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 SAC3D1A6NKF1 404 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 SIAH2O43255 324 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 HRGP04196 525 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 OR8G3PP0DMU2 310 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 OSMP13725 252 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 HIST1H1CP16403 213 aaKnown RBP16.24■□□□□ 0.19
CIRBP-245ENST00000621399 DAPP51397 102 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 NR1H2P55055 460 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 LEG1Q6P5S2 330 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 SEZ6L2Q6UXD5 910 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 CCDC36Q8IYA8 594 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 OR52E2Q8NGJ4 325 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 PLPPR2Q96GM1 343 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 NMNAT3Q96T66 252 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 SYT4Q9H2B2 425 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 CLEC4MQ9H2X3 399 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-245ENST00000621399 RERGLQ9H628 205 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 ESRP2Q9H6T0 727 aaKnown RBP16.24■□□□□ 0.19
CIRBP-245ENST00000621399 PAPOLBQ9NRJ5 636 aaKnown RBP16.24■□□□□ 0.19
CIRBP-245ENST00000621399 NPAP1Q9NZP6 1156 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 VSX1Q9NZR4 365 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-245ENST00000621399 OAZ3Q9UMX2 235 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 BAIAP2Q9UQB8 552 aa16.24■□□□□ 0.19
CIRBP-245ENST00000621399 M0R1B8 84 aa16.23■□□□□ 0.19
CIRBP-245ENST00000621399 SLC16A7O60669 478 aa16.23■□□□□ 0.19
CIRBP-245ENST00000621399 FARS2O95363 451 aaKnown RBP16.23■□□□□ 0.19
CIRBP-245ENST00000621399 RENP00797 406 aa16.23■□□□□ 0.19
CIRBP-245ENST00000621399 CD79AP11912 226 aa16.23■□□□□ 0.19
CIRBP-245ENST00000621399 CDAP32320 146 aa16.23■□□□□ 0.19
CIRBP-245ENST00000621399 GUCA1AP43080 201 aaPredicted RBP16.23■□□□□ 0.19
CIRBP-245ENST00000621399 LNX2Q8N448 690 aa16.23■□□□□ 0.19
CIRBP-245ENST00000621399 OR4Q3Q8NH05 313 aa16.23■□□□□ 0.19
CIRBP-245ENST00000621399 HTRA1Q92743 480 aa16.23■□□□□ 0.19
CIRBP-245ENST00000621399 SH3GL3Q99963 347 aa16.23■□□□□ 0.19
CIRBP-245ENST00000621399 GABARAPL1Q9H0R8 117 aa16.23■□□□□ 0.19
CIRBP-245ENST00000621399 SEC61A2Q9H9S3 476 aa16.23■□□□□ 0.19
CIRBP-245ENST00000621399 UGT2A1Q9Y4X1 527 aa16.23■□□□□ 0.19
CIRBP-245ENST00000621399 NBPF19A0A087WUL8 3843 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 A0A1W2PPL8 197 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 DPRXA6NFQ7 191 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 HLA-HP01893 362 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 CTLA4P16410 223 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 NPR2P20594 1047 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 PAX7P23759 505 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 MRPS34P82930 218 aaKnown RBP16.22■□□□□ 0.19
CIRBP-245ENST00000621399 PIGFQ07326 219 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.22■□□□□ 0.19
CIRBP-245ENST00000621399 GINS1Q14691 196 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 SGCAQ16586 387 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 NRN1LQ496H8 165 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 NCMAPQ5T1S8 102 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 TMEM108Q6UXF1 575 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 SKA3Q8IX90 412 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 IQCF1Q8N6M8 205 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 SDR9C7Q8NEX9 313 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 NANOS1Q8WY41 292 aaKnown RBP16.22■□□□□ 0.19
CIRBP-245ENST00000621399 HS3ST6Q96QI5 342 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 NUAK2Q9H093 628 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 SIAEQ9HAT2 523 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 MOV10Q9HCE1 1003 aaKnown RBP16.22■□□□□ 0.19
CIRBP-245ENST00000621399 KRT84Q9NSB2 600 aa16.22■□□□□ 0.19
CIRBP-245ENST00000621399 KHDRBS3O75525 346 aaKnown RBP16.21■□□□□ 0.19
CIRBP-245ENST00000621399 BAG2O95816 211 aa16.21■□□□□ 0.19
CIRBP-245ENST00000621399 CD3EP07766 207 aa16.21■□□□□ 0.19
CIRBP-245ENST00000621399 CRABP1P29762 137 aa16.21■□□□□ 0.19
CIRBP-245ENST00000621399 GIPRP48546 466 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms