RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TTYH2Q9BSA4 534 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 LINC00470Q9BZP3 86 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 CNOT2Q9NZN8 540 aaKnown RBP7.1□□□□□ -1.27
CPNE3-209ENST00000620393 FOXD3Q9UJU5 478 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-209ENST00000620393 BLOC1S6Q9UL45 172 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 ALPK2Q86TB3 2170 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 BSNQ9UPA5 3926 aa7.1□□□□□ -1.27
CPNE3-209ENST00000620393 TLN1Q9Y490 2541 aaKnown RBP7.09□□□□□ -1.27
CPNE3-209ENST00000620393 ATMQ13315 3056 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 DNAJC13O75165 2243 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 IGLV1-36A0A0B4J1U3 117 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 IGKV1D-43A0A0B4J1Z2 117 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 IRGMA1A4Y4 181 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 MAGEA13PA6NCF6 341 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 EFCAB10A6NFE3 127 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 FAM171A2A8MVW0 826 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 DHHO43323 396 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 TOXO94900 526 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 TNFAIP8O95379 198 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 IL2RAP01589 272 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 LYNP07948 512 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 DBTP11182 482 aaKnown RBP7.09□□□□□ -1.27
CPNE3-209ENST00000620393 PIPP12273 146 aaPredicted RBP7.09□□□□□ -1.27
CPNE3-209ENST00000620393 AGTR1P30556 359 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 GSTT1P30711 240 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 CASP6P55212 293 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 PER3P56645 1201 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 RPS7P62081 194 aaKnown RBP7.09□□□□□ -1.27
CPNE3-209ENST00000620393 SLC35A2P78381 396 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF91Q05481 1191 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 DBPQ10586 325 aaPredicted RBP7.09□□□□□ -1.27
CPNE3-209ENST00000620393 RAB40BQ12829 278 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 EIF2S3LQ2VIR3 472 aaKnown RBP7.09□□□□□ -1.27
CPNE3-209ENST00000620393 KCTD21Q4G0X4 260 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 C10orf128Q5T292 105 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 TSPO2Q5TGU0 170 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 TMEM211Q6ICI0 200 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 DNM1P34Q6PK57 102 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 B3GLCTQ6Y288 498 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 GLB1L2Q8IW92 636 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF100Q8IYN0 542 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 GPR137CQ8N3F9 429 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 POMGNT2Q8NAT1 580 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF540Q8NDQ6 660 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 NOXO1Q8NFA2 376 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 PROKR2Q8NFJ6 384 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 NSMAFQ92636 917 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 KISS1RQ969F8 398 aaPredicted RBP7.09□□□□□ -1.27
CPNE3-209ENST00000620393 MYDGFQ969H8 173 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 APH1AQ96BI3 265 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 LGALS12Q96DT0 336 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 ZMYND19Q96E35 227 aaPredicted RBP7.09□□□□□ -1.27
CPNE3-209ENST00000620393 RNFT2Q96EX2 444 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 ZFP3Q96NJ6 502 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 RACGAP1Q9H0H5 632 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 SLCO5A1Q9H2Y9 848 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 RERGLQ9H628 205 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 ZNF696Q9H7X3 374 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 FGF20Q9NP95 211 aaPredicted RBP7.09□□□□□ -1.27
CPNE3-209ENST00000620393 B3GAT2Q9NPZ5 323 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 PLSCR4Q9NRQ2 329 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 FKBP14Q9NWM8 211 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 EXOGQ9Y2C4 368 aaKnown RBP7.09□□□□□ -1.27
CPNE3-209ENST00000620393 COA3Q9Y2R0 106 aaPredicted RBP7.09□□□□□ -1.27
CPNE3-209ENST00000620393 EMC9Q9Y3B6 208 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 SPTA1P02549 2419 aa7.09□□□□□ -1.27
CPNE3-209ENST00000620393 E9PLN8 166 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 RPL36A-HNRNPH2H7BZ11 118 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 J3QRE1 110 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 MRPS14O60783 128 aaKnown RBP7.08□□□□□ -1.28
CPNE3-209ENST00000620393 TNFSF13O75888 250 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 KRT33AO76009 404 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 FADS2O95864 444 aaKnown RBP7.08□□□□□ -1.28
CPNE3-209ENST00000620393 CDK1P06493 297 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 STSP08842 583 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 RPSAP08865 295 aaKnown RBP7.08□□□□□ -1.28
CPNE3-209ENST00000620393 SBK2P0C263 348 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 TMIGD3P0DMS9 266 aaPredicted RBP7.08□□□□□ -1.28
CPNE3-209ENST00000620393 EEF1B2P24534 225 aaKnown RBP7.08□□□□□ -1.28
CPNE3-209ENST00000620393 EDNRAP25101 427 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 CTSSP25774 331 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 DCKP27707 260 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 LAP3P28838 519 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 ATP6V1E1P36543 226 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 GUCA1AP43080 201 aaPredicted RBP7.08□□□□□ -1.28
CPNE3-209ENST00000620393 CA7P43166 264 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 OR3A2P47893 321 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 GABARAPL2P60520 117 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 HSF2Q03933 536 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 GLO1Q04760 184 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 FMODQ06828 376 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 PMPCAQ10713 525 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 ST3GAL4Q11206 333 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 POU4F2Q12837 409 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 FOXF2Q12947 444 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 GGTLC2Q14390 218 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 STK11Q15831 433 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 KCNMB1Q16558 191 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 LCN1P1Q5VSP4 162 aa7.08□□□□□ -1.28
CPNE3-209ENST00000620393 FBXW9Q5XUX1 488 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms