RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 RPL27P61353 136 aaKnown RBP13.87□□□□□ -0.19
BRCA1-228ENST00000618469 FHL1Q13642 323 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 SEC23BQ15437 767 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 TAF11Q15544 211 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 HIST3H3Q16695 136 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 ANKDD1AQ495B1 522 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 VHLLQ6RSH7 139 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 RINLQ6ZS11 566 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 TMPRSS11FQ6ZWK6 438 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 PIWIL3Q7Z3Z3 882 aaKnown RBP13.87□□□□□ -0.19
BRCA1-228ENST00000618469 PHC2Q8IXK0 858 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 SLC22A24Q8N4F4 322 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 LRRC75AQ8NAA5 344 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 MAPK1IP1LQ8NDC0 245 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 OR4K5Q8NGD3 323 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 BCAS4Q8TDM0 211 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 MS4A3Q96HJ5 214 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 DHRS1Q96LJ7 313 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 TNFRSF13CQ96RJ3 184 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 GRIP2Q9C0E4 1043 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 NDEL1Q9GZM8 345 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 KRCC1Q9NPI7 259 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-228ENST00000618469 CA10Q9NS85 328 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 B3GNT2Q9NY97 397 aa13.87□□□□□ -0.19
BRCA1-228ENST00000618469 GDF2Q9UK05 429 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-228ENST00000618469 SONP18583 2426 aaKnown RBP13.87□□□□□ -0.19
BRCA1-228ENST00000618469 IGHV2OR16-5A0A0B4J2B6 119 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 NDUFS7O75251 213 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 ENTPD5O75356 428 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 IGHV4-39P01824 125 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 PATE4P0C8F1 98 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 OR8G3PP0DMU2 310 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 NR2C1P13056 603 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 APOBEC3AP31941 199 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-228ENST00000618469 RPL4P36578 427 aaKnown RBP13.86□□□□□ -0.19
BRCA1-228ENST00000618469 IQCCQ4KMZ1 466 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 C10orf128Q5T292 105 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 FAM205BPQ63HN1 556 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 SKA3Q8IX90 412 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 ARHGAP24Q8N264 748 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 CLDN22Q8N7P3 220 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 CCDC124Q96CT7 223 aaKnown RBP13.86□□□□□ -0.19
BRCA1-228ENST00000618469 FBXO17Q96EF6 278 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 RSRC1Q96IZ7 334 aaKnown RBP13.86□□□□□ -0.19
BRCA1-228ENST00000618469 KCNK17Q96T54 332 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 SH3GL3Q99963 347 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 ALG12Q9BV10 488 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 ACTR3BQ9P1U1 418 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 AURKCQ9UQB9 309 aa13.86□□□□□ -0.19
BRCA1-228ENST00000618469 A6NIZ1 184 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 H7C1C5 153 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 GADD45GO95257 159 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 T-ENOLP0DO92 83 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 ZNF14P17017 642 aaPredicted RBP13.85□□□□□ -0.19
BRCA1-228ENST00000618469 RRM2P31350 389 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 OMPP47874 163 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 LIMS1P48059 325 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 RAP1BP61224 184 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 LCN6P62502 163 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 RAB1AP62820 205 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 RAP1AP62834 184 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 ERVK-25P63136 954 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 SNTB2Q13425 540 aaKnown RBP13.85□□□□□ -0.19
BRCA1-228ENST00000618469 ETFDHQ16134 617 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 ZBED5Q49AG3 693 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 MTX3Q5HYI7 312 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 TRPM8Q7Z2W7 1104 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 ZDHHC21Q8IVQ6 265 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 OR4F15Q8NGB8 312 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 FGFBP3Q8TAT2 258 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 ZNF519Q8TB69 540 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 NSMAFQ92636 917 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 MUC13Q9H3R2 512 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 ZNF346Q9UL40 294 aaKnown RBP13.85□□□□□ -0.19
BRCA1-228ENST00000618469 PRPF19Q9UMS4 504 aaKnown RBP13.85□□□□□ -0.19
BRCA1-228ENST00000618469 ADAM18Q9Y3Q7 739 aa13.85□□□□□ -0.19
BRCA1-228ENST00000618469 IGKV1D-43A0A0B4J1Z2 117 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 SH3PXD2BA1X283 911 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 CRLF1O75462 422 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 ZNF26P17031 533 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-228ENST00000618469 ZNF133P52736 654 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-228ENST00000618469 SMIM11AP58511 58 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 SNRPD2P62316 118 aaKnown RBP13.84□□□□□ -0.19
BRCA1-228ENST00000618469 HGFACQ04756 655 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 CHRNB3Q05901 458 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 RAB39AQ14964 217 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 CLEC12BQ2HXU8 276 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 LCN8Q6JVE9 175 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 KRT80Q6KB66 452 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 SLC16A14Q7RTX9 510 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 DHFR2Q86XF0 187 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 NUP37Q8NFH4 326 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 NMD3Q96D46 503 aaKnown RBP13.84□□□□□ -0.19
BRCA1-228ENST00000618469 ZNF75AQ96N20 296 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 ZNF570Q96NI8 536 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 FUZQ9BT04 418 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 DENND2DQ9H6A0 471 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-228ENST00000618469 SMURF2Q9HAU4 748 aa13.84□□□□□ -0.19
BRCA1-228ENST00000618469 BARX1Q9HBU1 254 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-228ENST00000618469 IL1RAPQ9NPH3 570 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms