RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 SMAP2Q8WU79 429 aaPredicted RBP15.55■□□□□ 0.08
SREK1-216ENST00000612404 TMEM45BQ96B21 275 aa15.55■□□□□ 0.08
SREK1-216ENST00000612404 TBX5Q99593 518 aa15.55■□□□□ 0.08
SREK1-216ENST00000612404 RACGAP1Q9H0H5 632 aa15.55■□□□□ 0.08
SREK1-216ENST00000612404 DIMT1Q9UNQ2 313 aaKnown RBP15.55■□□□□ 0.08
SREK1-216ENST00000612404 SELENOFO60613 162 aa15.54■□□□□ 0.08
SREK1-216ENST00000612404 KHDRBS3O75525 346 aaKnown RBP15.54■□□□□ 0.08
SREK1-216ENST00000612404 DCKP27707 260 aa15.54■□□□□ 0.08
SREK1-216ENST00000612404 MAP2K4P45985 399 aa15.54■□□□□ 0.08
SREK1-216ENST00000612404 TUBA4AP68366 448 aa15.54■□□□□ 0.08
SREK1-216ENST00000612404 SF3B4Q15427 424 aaKnown RBP eCLIP15.54■□□□□ 0.08
SREK1-216ENST00000612404 ST3GAL2Q16842 350 aa15.54■□□□□ 0.08
SREK1-216ENST00000612404 PHYHD1Q5SRE7 291 aa15.54■□□□□ 0.08
SREK1-216ENST00000612404 LRFN4Q6PJG9 635 aa15.54■□□□□ 0.08
SREK1-216ENST00000612404 ERI1Q8IV48 349 aaKnown RBP15.54■□□□□ 0.08
SREK1-216ENST00000612404 C20orf196Q8IYI0 205 aa15.54■□□□□ 0.08
SREK1-216ENST00000612404 OR10H4Q8NGA5 316 aa15.54■□□□□ 0.08
SREK1-216ENST00000612404 TMEM54Q969K7 222 aa15.54■□□□□ 0.08
SREK1-216ENST00000612404 SIGLEC11Q96RL6 698 aa15.54■□□□□ 0.08
SREK1-216ENST00000612404 FGF20Q9NP95 211 aaPredicted RBP15.54■□□□□ 0.08
SREK1-216ENST00000612404 PARPBPQ9NWS1 579 aa15.54■□□□□ 0.08
SREK1-216ENST00000612404 MED12LQ86YW9 2145 aa15.54■□□□□ 0.08
SREK1-216ENST00000612404 FIGNL2A6NMB9 653 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 MRPS14O60783 128 aaKnown RBP15.53■□□□□ 0.08
SREK1-216ENST00000612404 GABRA1P14867 456 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 MYL12AP19105 171 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 GGTLC2Q14390 218 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 NEDD8Q15843 81 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 PCSK4Q6UW60 755 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 GCNT2Q8N0V5 402 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 SVOPQ8N4V2 548 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 POMGNT2Q8NAT1 580 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 FAM57AQ8TBR7 257 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 WNT2BQ93097 391 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 NMD3Q96D46 503 aaKnown RBP15.53■□□□□ 0.08
SREK1-216ENST00000612404 ULBP2Q9BZM5 246 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 FOXD3Q9UJU5 478 aaPredicted RBP15.53■□□□□ 0.08
SREK1-216ENST00000612404 ZGRF1Q86YA3 2104 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 A0A1W2PPL8 197 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 WDR1O75083 606 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 EMX1Q04741 257 aaPredicted RBP15.53■□□□□ 0.08
SREK1-216ENST00000612404 OTPQ5XKR4 325 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 GPR137CQ8N3F9 429 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 INTS12Q96CB8 462 aaKnown RBP15.53■□□□□ 0.08
SREK1-216ENST00000612404 GMPPAQ96IJ6 420 aaPredicted RBP15.53■□□□□ 0.08
SREK1-216ENST00000612404 VCX3AQ9NNX9 186 aa15.53■□□□□ 0.08
SREK1-216ENST00000612404 CHCHD3Q9NX63 227 aaKnown RBP15.53■□□□□ 0.08
SREK1-216ENST00000612404 C12orf71A8MTZ7 269 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 UPK3AO75631 287 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 KRT33AO76009 404 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 IGHV3-9P01782 118 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 AGTR1P30556 359 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 ETV1P50549 477 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 BLVRAP53004 296 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 HCCSP53701 268 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 BLMHQ13867 455 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 NSUN5P2Q63ZY6 315 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 SLC25A47Q6Q0C1 308 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 C3P1Q6ZMU1 363 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 LHFPL3Q86UP9 236 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 GLB1L2Q8IW92 636 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 C9orf106Q8NAJ2 232 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 ALKBH3Q96Q83 286 aaPredicted RBP15.52■□□□□ 0.08
SREK1-216ENST00000612404 CDCA4Q9BXL8 241 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 C12orf49Q9H741 205 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 WDR76Q9H967 626 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 SEC61A2Q9H9S3 476 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 GP6Q9HCN6 339 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 GLRX2Q9NS18 164 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 CLEC2DQ9UHP7 191 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 PCDHGB1Q9Y5G3 927 aa15.52■□□□□ 0.08
SREK1-216ENST00000612404 IGSF10Q6WRI0 2623 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 EPG5Q9HCE0 2579 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 TRIM64CA6NLI5 447 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 J3QRE1 110 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 MPZL1O95297 269 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 TFP02787 698 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 NUFIP2Q7Z417 695 aaKnown RBP15.52■□□□□ 0.07
SREK1-216ENST00000612404 SLC35F2Q8IXU6 374 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 ZNF100Q8IYN0 542 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 ACBD7Q8N6N7 88 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 OR6N2Q8NGY6 317 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 APH1AQ96BI3 265 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 INTS14Q96SY0 518 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 RBM24Q9BX46 236 aaKnown RBP15.52■□□□□ 0.07
SREK1-216ENST00000612404 SLCO5A1Q9H2Y9 848 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 B3GAT2Q9NPZ5 323 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 ERGIC3Q9Y282 383 aa15.52■□□□□ 0.07
SREK1-216ENST00000612404 EXOSC1Q9Y3B2 195 aaKnown RBP15.52■□□□□ 0.07
SREK1-216ENST00000612404 CACNA1BQ00975 2339 aa15.51■□□□□ 0.07
SREK1-216ENST00000612404 PHF3Q92576 2039 aaKnown RBP15.51■□□□□ 0.07
SREK1-216ENST00000612404 DAPL1A0PJW8 107 aa15.51■□□□□ 0.07
SREK1-216ENST00000612404 CD8B2A6NJW9 211 aa15.51■□□□□ 0.07
SREK1-216ENST00000612404 PRRG2O14669 202 aa15.51■□□□□ 0.07
SREK1-216ENST00000612404 IGHA1P01876 353 aa15.51■□□□□ 0.07
SREK1-216ENST00000612404 PCMT1P22061 227 aa15.51■□□□□ 0.07
SREK1-216ENST00000612404 EDNRAP25101 427 aa15.51■□□□□ 0.07
SREK1-216ENST00000612404 CDAP32320 146 aa15.51■□□□□ 0.07
SREK1-216ENST00000612404 PTGER4P35408 488 aa15.51■□□□□ 0.07
SREK1-216ENST00000612404 MEP1BQ16820 701 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms