RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 NMD3Q96D46 503 aaKnown RBP12.48□□□□□ -0.41
CTSA-219ENST00000607841 PLPPR2Q96GM1 343 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 TSSK6Q9BXA6 273 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 TMEM38BQ9NVV0 291 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 SEC14L2O76054 403 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 SOX14O95416 240 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 SLC2A10O95528 541 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 RENP00797 406 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 OSMP13725 252 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 PRF1P14222 555 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 PTAFRP25105 342 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 DNM1P34Q6PK57 102 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 SLC25A47Q6Q0C1 308 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 DPPA2Q7Z7J5 298 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 SLC22A24Q8N4F4 322 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 FAM169BQ8N8A8 192 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 NSMAFQ92636 917 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 RADILQ96JH8 1075 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 SNX18Q96RF0 628 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 OSBPL10Q9BXB5 764 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 TEX12Q9BXU0 123 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 PLA2G12AQ9BZM1 189 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 SEMA6AQ9H2E6 1030 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 KCNN2Q9H2S1 579 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 NELFAQ9H3P2 528 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 SIAEQ9HAT2 523 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 S100A14Q9HCY8 104 aa12.47□□□□□ -0.41
CTSA-219ENST00000607841 PAPOLBQ9NRJ5 636 aaKnown RBP12.47□□□□□ -0.41
CTSA-219ENST00000607841 VSX1Q9NZR4 365 aaPredicted RBP12.47□□□□□ -0.41
CTSA-219ENST00000607841 H3BNX3 289 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 H7C1C5 153 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 BHLHE40O14503 412 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 KHDRBS3O75525 346 aaKnown RBP12.46□□□□□ -0.41
CTSA-219ENST00000607841 UBL3O95164 117 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 CD3EP07766 207 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 CD79AP11912 226 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 CBR1P16152 277 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 HIST1H1CP16403 213 aaKnown RBP12.46□□□□□ -0.41
CTSA-219ENST00000607841 POU1F1P28069 291 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 CRABP1P29762 137 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 ARR3P36575 388 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 CDKN2AP42771 156 aaKnown RBP12.46□□□□□ -0.41
CTSA-219ENST00000607841 ZNF83P51522 516 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 LCN6P62502 163 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 MRPS34P82930 218 aaKnown RBP12.46□□□□□ -0.41
CTSA-219ENST00000607841 FMODQ06828 376 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 C3orf36Q3SXR2 165 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 SLC36A3Q495N2 470 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 NCMAPQ5T1S8 102 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 FAHD1Q6P587 224 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 LEG1Q6P5S2 330 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 DEPDC4Q8N2C3 294 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 LNX2Q8N448 690 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 OR52E2Q8NGJ4 325 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 OR8D4Q8NGM9 314 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 OR4K13Q8NH42 304 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 PKP2Q99959 881 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 C1QTNF6Q9BXI9 259 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 SYT4Q9H2B2 425 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 SEC61A2Q9H9S3 476 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 REV1Q9UBZ9 1251 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 ENOPH1Q9UHY7 261 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 FBXL3Q9UKT7 428 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 EDARQ9UNE0 448 aa12.46□□□□□ -0.41
CTSA-219ENST00000607841 ERICH4A6NGS2 130 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 M0R1B8 84 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 SIAH2O43255 324 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 SLC16A7O60669 478 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 IFNGP01579 166 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 TP53P04637 393 aaPredicted RBP12.45□□□□□ -0.42
CTSA-219ENST00000607841 IGFBP1P08833 259 aaPredicted RBP12.45□□□□□ -0.42
CTSA-219ENST00000607841 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.45□□□□□ -0.42
CTSA-219ENST00000607841 SGCAQ16586 387 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 GSG1Q2KHT4 349 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 SLC36A2Q495M3 483 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 SLC35F1Q5T1Q4 408 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 SLC27A4Q6P1M0 643 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 SEZ6L2Q6UXD5 910 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 PTCHD4Q6ZW05 846 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 SLC16A14Q7RTX9 510 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 CDC20BQ86Y33 519 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 PARP8Q8N3A8 854 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 ICA1LQ8NDH6 482 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 NMNAT3Q96T66 252 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 GABARAPL1Q9H0R8 117 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 KRT84Q9NSB2 600 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 NPAP1Q9NZP6 1156 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 KLHL21Q9UJP4 597 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 OAZ3Q9UMX2 235 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 RNF115Q9Y4L5 304 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 UGT2A1Q9Y4X1 527 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 FREM1Q5H8C1 2179 aa12.45□□□□□ -0.42
CTSA-219ENST00000607841 ANKHD1Q8IWZ3 2542 aaKnown RBP12.44□□□□□ -0.42
CTSA-219ENST00000607841 IGKV1D-43A0A0B4J1Z2 117 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 A0A1W2PPL8 197 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 DPRXA6NFQ7 191 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 RAB36O95755 333 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 IGKV3-15P01624 115 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 HLA-HP01893 362 aa12.44□□□□□ -0.42
CTSA-219ENST00000607841 HMGN1P05114 100 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms