RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 TMCC3Q9ULS5 477 aa12.28□□□□□ -0.44
LIG1-218ENST00000599322 IGHV2OR16-5A0A0B4J2B6 119 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 A0A1W2PRQ8 180 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 B2RBV5 119 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 EFNA4P52798 201 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 PPP2R2BQ00005 443 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 MYBPC1Q00872 1141 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 HSF2Q03933 536 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 SNTB2Q13425 540 aaKnown RBP12.27□□□□□ -0.45
LIG1-218ENST00000599322 DGCR6Q14129 220 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 ZBED5Q49AG3 693 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 C11orf71Q6IPW1 123 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 UNQ6126/PRO20091Q6UXV3 157 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 TMPRSS11FQ6ZWK6 438 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 SKA3Q8IX90 412 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 OR4K5Q8NGD3 323 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 TNFRSF13CQ96RJ3 184 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 ZNF347Q96SE7 839 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 REG4Q9BYZ8 158 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 PLK3Q9H4B4 646 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 GPR160Q9UJ42 338 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 ZNF346Q9UL40 294 aaKnown RBP12.27□□□□□ -0.45
LIG1-218ENST00000599322 V9GYQ6 96 aa12.27□□□□□ -0.45
LIG1-218ENST00000599322 FN1P02751 2386 aaKnown RBP12.27□□□□□ -0.45
LIG1-218ENST00000599322 ABCA2Q9BZC7 2435 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 TRAV27A0A087WT01 109 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 hCG_2039718K7EN88 272 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 FFAR1O14842 300 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 GADD45GO95257 159 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 SERPINA5P05154 406 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 FABP3P05413 133 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 HEXAP06865 529 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 CELA3BP08861 270 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 TSPAN19P0C672 248 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 MAKP20794 623 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 CALCRP30988 508 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 APLNRP35414 380 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 GPR4P46093 362 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 RAB39AQ14964 217 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 EFNB3Q15768 340 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 SGCAQ16586 387 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 ARMC4Q5T2S8 1044 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 KRT80Q6KB66 452 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 ALDH16A1Q8IZ83 802 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 FAM156AQ8NDB6 213 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 RBM15BQ8NDT2 890 aaKnown RBP12.26□□□□□ -0.45
LIG1-218ENST00000599322 FAM168AQ92567 244 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 NSMAFQ92636 917 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 SH3GL3Q99963 347 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 MRPL13Q9BYD1 178 aaKnown RBP12.26□□□□□ -0.45
LIG1-218ENST00000599322 SEC61A2Q9H9S3 476 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 SIAEQ9HAT2 523 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 NOX3Q9HBY0 568 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 MYOZ1Q9NP98 299 aaPredicted RBP12.26□□□□□ -0.45
LIG1-218ENST00000599322 NDUFAF4Q9P032 175 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 SLC7A8Q9UHI5 535 aa12.26□□□□□ -0.45
LIG1-218ENST00000599322 RNF223E7ERA6 249 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 AHCYL1O43865 530 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 NDUFS7O75251 213 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 NDUFB2O95178 105 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 F12P00748 615 aaPredicted RBP12.25□□□□□ -0.45
LIG1-218ENST00000599322 SLC25A16P16260 332 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 CALB2P22676 271 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 NR4A1P22736 598 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 THBS4P35443 961 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 PDLIM4P50479 330 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 PCBD1P61457 104 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 MRPS34P82930 218 aaKnown RBP12.25□□□□□ -0.45
LIG1-218ENST00000599322 SPIBQ01892 262 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 ADIPOQQ15848 244 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 HIST3H3Q16695 136 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 SWI5Q1ZZU3 235 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 TBC1D28Q2M2D7 210 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 MTX3Q5HYI7 312 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 C10orf128Q5T292 105 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 GPR139Q6DWJ6 353 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 PODNL1Q6PEZ8 512 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 TBPL2Q6SJ96 375 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 LRRC18Q8N456 261 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 ARIH2OSQ8N7S6 290 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 SLC30A7Q8NEW0 376 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 OR13C2Q8NGS9 318 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 SLC7A13Q8TCU3 470 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 FAM46AQ96IP4 442 aaKnown RBP12.25□□□□□ -0.45
LIG1-218ENST00000599322 MUC13Q9H3R2 512 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 MAN2C1Q9NTJ4 1040 aa12.25□□□□□ -0.45
LIG1-218ENST00000599322 EIF3KQ9UBQ5 218 aaKnown RBP12.25□□□□□ -0.45
LIG1-218ENST00000599322 ARPC2O15144 300 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 PRSS23O95084 383 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 LY6G6DO95868 133 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 IGHMP01871 453 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 CD14P08571 375 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 ZNF14P17017 642 aaPredicted RBP12.24□□□□□ -0.45
LIG1-218ENST00000599322 MSX2P35548 267 aaPredicted RBP12.24□□□□□ -0.45
LIG1-218ENST00000599322 GLRXP35754 106 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 RAD52P43351 418 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 PPOXP50336 477 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 RPS6KA3P51812 740 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 ERVK-25P63136 954 aa12.24□□□□□ -0.45
LIG1-218ENST00000599322 VLDLRP98155 873 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms