RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 BAG5Q9UL15 447 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 MALRD1Q5VYJ5 2156 aa12.3□□□□□ -0.44
VMP1-206ENST00000587945 YLPM1P49750 1951 aaKnown RBP12.3□□□□□ -0.44
VMP1-206ENST00000587945 A0A1W2PRG6 482 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 WNT9BO14905 357 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 PIP5K1CO60331 668 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 OR5F1O95221 314 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 SLC2A10O95528 541 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 ACADSP16219 412 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 FUT4P22083 530 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 CDAP32320 146 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 THBS2P35442 1172 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 RBM34P42696 430 aaKnown RBP12.29□□□□□ -0.44
VMP1-206ENST00000587945 ARFIP2P53365 341 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 CDH15P55291 814 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 LAPTM4AQ15012 233 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 LRRC23Q53EV4 343 aaPredicted RBP12.29□□□□□ -0.44
VMP1-206ENST00000587945 CYBRD1Q53TN4 286 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 RGS7BPQ6MZT1 257 aaPredicted RBP12.29□□□□□ -0.44
VMP1-206ENST00000587945 CGB2Q6NT52 195 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 RDH5Q92781 318 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 C19orf24Q9BVV8 132 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 CDH20Q9HBT6 801 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 INIPQ9NRY2 104 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 FGFR1OP2Q9NVK5 253 aa12.29□□□□□ -0.44
VMP1-206ENST00000587945 GMPR2Q9P2T1 348 aaKnown RBP12.29□□□□□ -0.44
VMP1-206ENST00000587945 IGKV1D-43A0A0B4J1Z2 117 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 ENTPD5O75356 428 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 LCKP06239 509 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 TROVE2P10155 538 aaKnown RBP eCLIP12.28□□□□□ -0.44
VMP1-206ENST00000587945 MAGEB1P43366 347 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 GPR6P46095 362 aaPredicted RBP12.28□□□□□ -0.44
VMP1-206ENST00000587945 ZNF84P51523 738 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 FMODQ06828 376 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 NKPD1Q17RQ9 610 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 SLC36A2Q495M3 483 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 COQ5Q5HYK3 327 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 ARMC4Q5T2S8 1044 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 MEX3DQ86XN8 651 aaKnown RBP12.28□□□□□ -0.44
VMP1-206ENST00000587945 ICA1LQ8NDH6 482 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 RBM15BQ8NDT2 890 aaKnown RBP12.28□□□□□ -0.44
VMP1-206ENST00000587945 NSMAFQ92636 917 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 HDAC2Q92769 488 aaKnown RBP12.28□□□□□ -0.44
VMP1-206ENST00000587945 C1orf159Q96HA4 380 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 TPD52L3Q96J77 140 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 SEPHS2Q99611 448 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 ZNF275Q9NSD4 429 aaPredicted RBP12.28□□□□□ -0.44
VMP1-206ENST00000587945 TMEFF2Q9UIK5 374 aaPredicted RBP12.28□□□□□ -0.44
VMP1-206ENST00000587945 MED31Q9Y3C7 131 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 UGT2A1Q9Y4X1 527 aa12.28□□□□□ -0.44
VMP1-206ENST00000587945 PPIHO43447 177 aaKnown RBP12.27□□□□□ -0.45
VMP1-206ENST00000587945 MMP7P09237 267 aaPredicted RBP12.27□□□□□ -0.45
VMP1-206ENST00000587945 ACHEP22303 614 aa12.27□□□□□ -0.45
VMP1-206ENST00000587945 KDELR2P33947 212 aa12.27□□□□□ -0.45
VMP1-206ENST00000587945 SRP14P37108 136 aaKnown RBP12.27□□□□□ -0.45
VMP1-206ENST00000587945 YAP1P46937 504 aaKnown RBP12.27□□□□□ -0.45
VMP1-206ENST00000587945 DAP3P51398 398 aaKnown RBP12.27□□□□□ -0.45
VMP1-206ENST00000587945 HSF2Q03933 536 aa12.27□□□□□ -0.45
VMP1-206ENST00000587945 TOP3AQ13472 1001 aaPredicted RBP12.27□□□□□ -0.45
VMP1-206ENST00000587945 TBC1D28Q2M2D7 210 aa12.27□□□□□ -0.45
VMP1-206ENST00000587945 ERICH5Q6P6B1 374 aa12.27□□□□□ -0.45
VMP1-206ENST00000587945 RINLQ6ZS11 566 aa12.27□□□□□ -0.45
VMP1-206ENST00000587945 DPPA2Q7Z7J5 298 aa12.27□□□□□ -0.45
VMP1-206ENST00000587945 CPEB3Q8NE35 698 aaKnown RBP12.27□□□□□ -0.45
VMP1-206ENST00000587945 CLDND2Q8NHS1 167 aa12.27□□□□□ -0.45
VMP1-206ENST00000587945 SYNPRQ8TBG9 265 aa12.27□□□□□ -0.45
VMP1-206ENST00000587945 GTF3AQ92664 365 aaKnown RBP12.27□□□□□ -0.45
VMP1-206ENST00000587945 NMD3Q96D46 503 aaKnown RBP12.27□□□□□ -0.45
VMP1-206ENST00000587945 POLR2J2Q9GZM3 115 aaKnown RBP12.27□□□□□ -0.45
VMP1-206ENST00000587945 POLR2J3Q9H1A7 115 aaKnown RBP12.27□□□□□ -0.45
VMP1-206ENST00000587945 LPAR2Q9HBW0 351 aa12.27□□□□□ -0.45
VMP1-206ENST00000587945 TREM2Q9NZC2 230 aa12.27□□□□□ -0.45
VMP1-206ENST00000587945 ZNF346Q9UL40 294 aaKnown RBP12.27□□□□□ -0.45
VMP1-206ENST00000587945 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.27□□□□□ -0.451e-5■■■■□ 21.5
VMP1-206ENST00000587945 IQCMA0A1B0GVH7 501 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 SLC22A23A1A5C7 686 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 BBIP1A8MTZ0 92 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 FAM220BPB1ANY3 271 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 CENPBD1B2RD01 187 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 FAM157AC9JC47 383 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 CDC14BO60729 498 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 RP2O75695 350 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 SNAP29O95721 258 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 NPPAP01160 153 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 IFNA14P01570 189 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 VIMP08670 466 aaKnown RBP12.26□□□□□ -0.45
VMP1-206ENST00000587945 TSPAN19P0C672 248 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 SAGP10523 405 aaPredicted RBP12.26□□□□□ -0.45
VMP1-206ENST00000587945 ZNF250P15622 560 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 CCNOP22674 350 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 APLNRP35414 380 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 ZNF133P52736 654 aaPredicted RBP12.26□□□□□ -0.45
VMP1-206ENST00000587945 UCP2P55851 309 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 KLF3P57682 345 aaPredicted RBP12.26□□□□□ -0.45
VMP1-206ENST00000587945 SELENOVP59797 346 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 CCL8P80075 99 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 GLO1Q04760 184 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 PLP2Q04941 152 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 CD47Q08722 323 aa12.26□□□□□ -0.45
VMP1-206ENST00000587945 MAPRE2Q15555 327 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms