RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 POLR2J2Q9GZM3 115 aaKnown RBP16.1■□□□□ 0.17
TRIM47-205ENST00000587774 POLR2J3Q9H1A7 115 aaKnown RBP16.1■□□□□ 0.17
TRIM47-205ENST00000587774 RNF121Q9H920 327 aa16.1■□□□□ 0.17
TRIM47-205ENST00000587774 RIMS3Q9UJD0 308 aa16.1■□□□□ 0.17
TRIM47-205ENST00000587774 TENM1Q9UKZ4 2725 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 BBIP1A8MTZ0 92 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 TRMUO75648 421 aaKnown RBP16.09■□□□□ 0.17
TRIM47-205ENST00000587774 TROVE2P10155 538 aaKnown RBP eCLIP16.09■□□□□ 0.17
TRIM47-205ENST00000587774 ACADSP16219 412 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 FUT1P19526 365 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 ACHEP22303 614 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 AQP2P41181 271 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 DAP3P51398 398 aaKnown RBP16.09■□□□□ 0.17
TRIM47-205ENST00000587774 ZNF84P51523 738 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 ERVS71-1P61550 626 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 ALKBH6Q3KRA9 238 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 NRN1LQ496H8 165 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 LRRC23Q53EV4 343 aaPredicted RBP16.09■□□□□ 0.17
TRIM47-205ENST00000587774 ERICH5Q6P6B1 374 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 LRRC18Q8N456 261 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 MOSPD2Q8NHP6 518 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 YIPF5Q969M3 257 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 SGTBQ96EQ0 304 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 C1orf159Q96HA4 380 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 ZNF583Q96ND8 569 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 C1orf198Q9H425 327 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 NARFLQ9H6Q4 476 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 CDH20Q9HBT6 801 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 SAR1AQ9NR31 198 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 INIPQ9NRY2 104 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 FGFR1OP2Q9NVK5 253 aa16.09■□□□□ 0.17
TRIM47-205ENST00000587774 CENPBD1B2RD01 187 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 PIP5K1CO60331 668 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 SLC2A10O95528 541 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 SNAP29O95721 258 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 CLPTM1O96005 669 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 NPPAP01160 153 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 IGF2P01344 180 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 MMP7P09237 267 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-205ENST00000587774 TSPAN19P0C672 248 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 COL8A2P25067 703 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 ZNF133P52736 654 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-205ENST00000587774 NKPD1Q17RQ9 610 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 TBC1D28Q2M2D7 210 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 CYBRD1Q53TN4 286 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 C10orf128Q5T292 105 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 HDDC2Q7Z4H3 204 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 DPPA2Q7Z7J5 298 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 RBM15BQ8NDT2 890 aaKnown RBP16.08■□□□□ 0.16
TRIM47-205ENST00000587774 C10orf82Q8WW14 230 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 RDH5Q92781 318 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 TSPAN32Q96QS1 320 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 C19orf24Q9BVV8 132 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 ZNF275Q9NSD4 429 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-205ENST00000587774 MRGBPQ9NV56 204 aa16.08■□□□□ 0.16
TRIM47-205ENST00000587774 ZNF346Q9UL40 294 aaKnown RBP16.08■□□□□ 0.16
TRIM47-205ENST00000587774 NBEAL1Q6ZS30 2694 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 SLC22A23A1A5C7 686 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 FAM220BPB1ANY3 271 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 MAGEB1P43366 347 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 GPR6P46095 362 aaPredicted RBP16.07■□□□□ 0.16
TRIM47-205ENST00000587774 ARFIP2P53365 341 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 KLF3P57682 345 aaPredicted RBP16.07■□□□□ 0.16
TRIM47-205ENST00000587774 FMODQ06828 376 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 MAPRE2Q15555 327 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 ARMC4Q5T2S8 1044 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 CLDND2Q8NHS1 167 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 LIPHQ8WWY8 451 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 TAAR3PQ9P1P4 343 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 TMEFF2Q9UIK5 374 aaPredicted RBP16.07■□□□□ 0.16
TRIM47-205ENST00000587774 MED31Q9Y3C7 131 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 UGT2A1Q9Y4X1 527 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 DOCK11Q5JSL3 2073 aa16.07■□□□□ 0.16
TRIM47-205ENST00000587774 IGLV3-9A0A075B6K5 115 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 IGKV1D-43A0A0B4J1Z2 117 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 NPIPB13A6NJU9 1138 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 NPIPB4C9JG80 1138 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 WNT9BO14905 357 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 RP2O75695 350 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 PTHP01270 115 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 IFNA14P01570 189 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 LCKP06239 509 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 SAGP10523 405 aaPredicted RBP16.06■□□□□ 0.16
TRIM47-205ENST00000587774 THRBP10828 461 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 ZNF250P15622 560 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 CDAP32320 146 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 DVL1P1P54792 670 aaPredicted RBP16.06■□□□□ 0.16
TRIM47-205ENST00000587774 UGT2A3Q6UWM9 527 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 RINLQ6ZS11 566 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 SYNPRQ8TBG9 265 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 HDAC2Q92769 488 aaKnown RBP16.06■□□□□ 0.16
TRIM47-205ENST00000587774 NABP1Q96AH0 204 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 NMD3Q96D46 503 aaKnown RBP16.06■□□□□ 0.16
TRIM47-205ENST00000587774 TPD52L3Q96J77 140 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 RACGAP1Q9H0H5 632 aa16.06■□□□□ 0.16
TRIM47-205ENST00000587774 STX18Q9P2W9 335 aaKnown RBP16.06■□□□□ 0.16
TRIM47-205ENST00000587774 LOC100653049A0A140TA62 436 aa16.05■□□□□ 0.16
TRIM47-205ENST00000587774 IQCMA0A1B0GVH7 501 aa16.05■□□□□ 0.16
TRIM47-205ENST00000587774 C17orf100A8MU93 164 aa16.05■□□□□ 0.16
TRIM47-205ENST00000587774 KRT34O76011 436 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms