RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 LOC100130705A0A1B0GUX0 176 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 OR6C68A6NDL8 312 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 ZNF99A8MXY4 864 aaPredicted RBP11.98□□□□□ -0.49
VMP1-203ENST00000586245 PRR23D1E9PI22 279 aaPredicted RBP11.98□□□□□ -0.49
VMP1-203ENST00000586245 H0YJX3 145 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 DLGAP1O14490 977 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 KHDRBS3O75525 346 aaKnown RBP11.98□□□□□ -0.49
VMP1-203ENST00000586245 RAD51DO75771 328 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 RNF224P0DH78 156 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 PRR23D2P0DMB1 279 aaPredicted RBP11.98□□□□□ -0.49
VMP1-203ENST00000586245 GGT2P36268 569 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 VHLP40337 213 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 FOXG1P55316 489 aaPredicted RBP11.98□□□□□ -0.49
VMP1-203ENST00000586245 ARF1P84077 181 aaKnown RBP11.98□□□□□ -0.49
VMP1-203ENST00000586245 ZNF362Q5T0B9 420 aaPredicted RBP11.98□□□□□ -0.49
VMP1-203ENST00000586245 TTC23Q5W5X9 447 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 OR7E24Q6IFN5 339 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 STEAP2Q8NFT2 490 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 FAM81AQ8TBF8 368 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 CYGBQ8WWM9 190 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 NMD3Q96D46 503 aaKnown RBP11.98□□□□□ -0.49
VMP1-203ENST00000586245 ZNF837Q96EG3 531 aaPredicted RBP11.98□□□□□ -0.49
VMP1-203ENST00000586245 HRASLS5Q96KN8 279 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 FOXB1Q99853 325 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 USB1Q9BQ65 265 aaKnown RBP11.98□□□□□ -0.49
VMP1-203ENST00000586245 RASSF4Q9H2L5 321 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 FN3KQ9H479 309 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 FKBP7Q9Y680 259 aa11.98□□□□□ -0.49
VMP1-203ENST00000586245 IGKV1D-43A0A0B4J1Z2 117 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 A0A1W2PPL8 197 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 SLC16A6O15403 523 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 CTLA4P16410 223 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 HOXC12P31275 282 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 UGT2B10P36537 528 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 CENPAP49450 140 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 SLC25A1P53007 311 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 SORDQ00796 357 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 TFF3Q07654 80 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 KEAP1Q14145 624 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 TSC22D1Q15714 1073 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 SNCBQ16143 134 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 ANKRD16Q6P6B7 361 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 ZNF813Q6ZN06 617 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 DEPDC4Q8N2C3 294 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 TCEANCQ8N8B7 351 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 C1orf162Q8NEQ5 155 aaPredicted RBP11.97□□□□□ -0.49
VMP1-203ENST00000586245 PROKR2Q8NFJ6 384 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 OR9Q1Q8NGQ5 310 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 OR1K1Q8NGR3 316 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 OR2T4Q8NH00 348 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 TSSK2Q96PF2 358 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 DDOQ99489 341 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 PITX2Q99697 317 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 RACGAP1Q9H0H5 632 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 OR10A4Q9H209 315 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 SEC61A2Q9H9S3 476 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 NDRG4Q9ULP0 352 aaKnown RBP11.97□□□□□ -0.49
VMP1-203ENST00000586245 B9D1Q9UPM9 204 aa11.97□□□□□ -0.49
VMP1-203ENST00000586245 KLF2Q9Y5W3 355 aaPredicted RBP11.97□□□□□ -0.49
VMP1-203ENST00000586245 FAM183AA6NL82 134 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 E9PQ18 207 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 M0R129 80 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 TLX2O43763 284 aaPredicted RBP11.96□□□□□ -0.49
VMP1-203ENST00000586245 PRKYO43930 277 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 SEC14L2O76054 403 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 FARS2O95363 451 aaKnown RBP11.96□□□□□ -0.49
VMP1-203ENST00000586245 SPI1P17947 270 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 NPR2P20594 1047 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 LAP3P28838 519 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 CAPGP40121 348 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 PEX19P40855 299 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 AQP4P55087 323 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 ETFDHQ16134 617 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 GABRA6Q16445 453 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 SGCAQ16586 387 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 PLBD1Q6P4A8 553 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 KLHL24Q6TFL4 600 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 IZUMO2Q6UXV1 221 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 CXXC5Q7LFL8 322 aaKnown RBP11.96□□□□□ -0.49
VMP1-203ENST00000586245 ZBTB46Q86UZ6 589 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 CPOQ8IVL8 374 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 GLB1L2Q8IW92 636 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 OR6V1Q8N148 313 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 C17orf78Q8N4C9 275 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 OR8J1Q8NGP2 316 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 TMEM163Q8TC26 289 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 TRUB1Q8WWH5 349 aaKnown RBP11.96□□□□□ -0.49
VMP1-203ENST00000586245 MUS81Q96NY9 551 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 IL4I1Q96RQ9 567 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 APOL4Q9BPW4 351 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 ADI1Q9BV57 179 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 NMNAT2Q9BZQ4 307 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 ACTR6Q9GZN1 396 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 MED20Q9H944 212 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 HINT3Q9NQE9 182 aaKnown RBP11.96□□□□□ -0.49
VMP1-203ENST00000586245 TMEM38BQ9NVV0 291 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 H2AFY2Q9P0M6 372 aaPredicted RBP11.96□□□□□ -0.49
VMP1-203ENST00000586245 COA3Q9Y2R0 106 aaPredicted RBP11.96□□□□□ -0.49
VMP1-203ENST00000586245 UGT2A1Q9Y4X1 527 aa11.96□□□□□ -0.49
VMP1-203ENST00000586245 FREM1Q5H8C1 2179 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms