RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 SYT4Q9H2B2 425 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 WDR76Q9H967 626 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 HMG20AQ9NP66 347 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 TXNL4BQ9NX01 149 aaKnown RBP9.3□□□□□ -0.92
LIG3-203ENST00000585370 KLHL9Q9P2J3 617 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 B4GALT7Q9UBV7 327 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 HRH3Q9Y5N1 445 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 PEX16Q9Y5Y5 336 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 PCNX3Q9H6A9 2034 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 CENPEQ02224 2701 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 OR2M5A3KFT3 312 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 METTL15A6NJ78 407 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 AQP7P3A6NL99 342 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 MKRN2OSH3BPM6 223 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 GPRIN2O60269 458 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 TMCC2O75069 709 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 RGS9O75916 674 aaPredicted RBP9.29□□□□□ -0.92
LIG3-203ENST00000585370 AKR7A3O95154 331 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 TFP02787 698 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 IFNGR1P15260 489 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 ZNF43P17038 809 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 IL11P20809 199 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 NAA10P41227 235 aaPredicted RBP9.29□□□□□ -0.92
LIG3-203ENST00000585370 AGFG1P52594 562 aaKnown RBP9.29□□□□□ -0.92
LIG3-203ENST00000585370 OR12D2P58182 307 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 RPS3AP61247 264 aaKnown RBP9.29□□□□□ -0.92
LIG3-203ENST00000585370 SIRPAP78324 504 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 GLO1Q04760 184 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 RUNX1T1Q06455 604 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 EGR3Q06889 387 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 ZNF846Q147U1 533 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 TEX30Q5JUR7 227 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 THEM4Q5T1C6 240 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 AGAP7PQ5VUJ5 663 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 DMKNQ6E0U4 476 aaPredicted RBP9.29□□□□□ -0.92
LIG3-203ENST00000585370 TUBA3EQ6PEY2 450 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 NHLRC1Q6VVB1 395 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 FAM220AQ7Z4H9 259 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 ZNF227Q86WZ6 799 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 CDC20BQ86Y33 519 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 GALNT16Q8N428 558 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 TEX19Q8NA77 164 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 OR51L1Q8NGJ5 315 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 OR6Q1Q8NGQ2 317 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 OR6X1Q8NH79 312 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 ZPLD1Q8TCW7 415 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 BORCS5Q969J3 196 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 SLC25A44Q96H78 314 aaPredicted RBP9.29□□□□□ -0.92
LIG3-203ENST00000585370 AGAP4Q96P64 663 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 PSMG3-AS1Q96PY0 264 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 KCNK17Q96T54 332 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 SF3B5Q9BWJ5 86 aaKnown RBP9.29□□□□□ -0.92
LIG3-203ENST00000585370 ISG20L2Q9H9L3 353 aaKnown RBP9.29□□□□□ -0.92
LIG3-203ENST00000585370 PALMDQ9NP74 551 aa9.29□□□□□ -0.92
LIG3-203ENST00000585370 KLF13Q9Y2Y9 288 aaPredicted RBP9.29□□□□□ -0.92
LIG3-203ENST00000585370 MPDZO75970 2070 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 TNRC6AQ8NDV7 1962 aaKnown RBP9.28□□□□□ -0.92
LIG3-203ENST00000585370 UNC79Q9P2D8 2635 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 IGLV1-36A0A0B4J1U3 117 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 ZNF726A6NNF4 738 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 SHISA8B8ZZ34 492 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 CLDN25C9JDP6 229 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 KLRC4-KLRK1H3BQV0 150 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 MASP2O00187 686 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 SELENOFO60613 162 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 SLC16A7O60669 478 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 LALBAP00709 142 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 PLGP00747 810 aaPredicted RBP9.28□□□□□ -0.92
LIG3-203ENST00000585370 IGHG1P01857 330 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 HRGP04196 525 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 KRT8P05787 483 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 INHBBP09529 407 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 CD46P15529 392 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 ALOX5APP20292 161 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 S100A5P33763 92 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 SFTPDP35247 375 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 CD79BP40259 229 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 DNASE1L1P49184 302 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 P2RY4P51582 365 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 BMXP51813 675 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 RAC3P60763 192 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 RPS25P62851 125 aaKnown RBP9.28□□□□□ -0.92
LIG3-203ENST00000585370 H3F3AP84243 136 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 POU3F1Q03052 451 aaPredicted RBP9.28□□□□□ -0.92
LIG3-203ENST00000585370 DOC2BQ14184 412 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 POU4F3Q15319 338 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 TOMM20Q15388 145 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 OR1C1Q15619 314 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 ZNF684Q5T5D7 378 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 SLC25A25Q6KCM7 469 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 ZNF544Q6NX49 715 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 KCTD18Q6PI47 426 aaPredicted RBP9.28□□□□□ -0.92
LIG3-203ENST00000585370 ESPNLQ6ZVH7 1005 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 TPRA1Q86W33 373 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 ZNF511Q8NB15 262 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 OR14L1PQ8NHC6 308 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 ZNRF4Q8WWF5 429 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 HAS2Q92819 552 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 INTS12Q96CB8 462 aaKnown RBP9.28□□□□□ -0.92
LIG3-203ENST00000585370 TSSK2Q96PF2 358 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms