RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 IL20Q9NYY1 176 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 CRIM1Q9NZV1 1036 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 KCNN3Q9UGI6 736 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 KLHL21Q9UJP4 597 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 AMDHD2Q9Y303 409 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 ZFHX3Q15911 3703 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 MED13LQ71F56 2210 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 OR5H1A6NKK0 313 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 RPL36A-HNRNPH2H7BZ11 118 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 H7C1C5 153 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 ARPC3O15145 178 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 ITGA5P08648 1049 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 EPXP11678 715 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 B4GALT1P15291 398 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 CRABP1P29762 137 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 RAD23AP54725 363 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 RIPPLY3P57055 190 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 KRTAP10-9P60411 292 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 LCN6P62502 163 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 FHL1Q13642 323 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 FAHD1Q6P587 224 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 CCDC36Q8IYA8 594 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 OR52E2Q8NGJ4 325 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 OR1K1Q8NGR3 316 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 OR4K13Q8NH42 304 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 ZNF519Q8TB69 540 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 HDAC2Q92769 488 aaKnown RBP12.18□□□□□ -0.46
TRAF4-215ENST00000584944 WFIKKN1Q96NZ8 548 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 FOXB1Q99853 325 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 KCNS3Q9BQ31 491 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 VCXQ9H320 206 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 OBP2BQ9NPH6 170 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 ITGB1BP2Q9UKP3 347 aa12.18□□□□□ -0.46
TRAF4-215ENST00000584944 SPG11Q96JI7 2443 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 PDLIM1O00151 329 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 RRP9O43818 475 aaKnown RBP12.17□□□□□ -0.46
TRAF4-215ENST00000584944 SLC16A7O60669 478 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 SEC14L2O76054 403 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 SLC2A10O95528 541 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 HLA-DQA2P01906 255 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 HMGN1P05114 100 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 OR8G3PP0DMU2 310 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 CD79AP11912 226 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 HIST1H1CP16403 213 aaKnown RBP12.17□□□□□ -0.46
TRAF4-215ENST00000584944 ZNF26P17031 533 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-215ENST00000584944 NPR2P20594 1047 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 PAX7P23759 505 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 ESRRGP62508 458 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 ELF3P78545 371 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-215ENST00000584944 RUNX1T1Q06455 604 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 FMODQ06828 376 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRAF4-215ENST00000584944 GINS1Q14691 196 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 TRIP10Q15642 601 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 GABRA6Q16445 453 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 SGCAQ16586 387 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 HIKESHIQ53FT3 197 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 MESTQ5EB52 335 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 C1QTNF12Q5T7M4 302 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 ZBTB49Q6ZSB9 765 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 KCNK17Q96T54 332 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 NMNAT3Q96T66 252 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 MRPL13Q9BYD1 178 aaKnown RBP12.17□□□□□ -0.46
TRAF4-215ENST00000584944 PLA2G12AQ9BZM1 189 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 GABARAPL1Q9H0R8 117 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 SYT4Q9H2B2 425 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 RIBC2Q9H4K1 309 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 ESRP2Q9H6T0 727 aaKnown RBP12.17□□□□□ -0.46
TRAF4-215ENST00000584944 DCLRE1BQ9H816 532 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 RNF121Q9H920 327 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 CCNB1IP1Q9NPC3 277 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 POLR1DQ9Y2S0 133 aa12.17□□□□□ -0.46
TRAF4-215ENST00000584944 SETD2Q9BYW2 2564 aaPredicted RBP12.16□□□□□ -0.46
TRAF4-215ENST00000584944 A0A1W2PR80 420 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 SLC22A23A1A5C7 686 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 KHDRBS3O75525 346 aaKnown RBP12.16□□□□□ -0.46
TRAF4-215ENST00000584944 RAB36O95755 333 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 TXNDC12O95881 172 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 HOXB1P14653 301 aaPredicted RBP12.16□□□□□ -0.46
TRAF4-215ENST00000584944 ANPEPP15144 967 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 CCKARP32238 428 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 DAPP51397 102 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 CRISP1P54107 249 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 FXYD6P3P58550 94 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 TESK1Q15569 626 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 TAB1Q15750 504 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 PGGHGQ32M88 737 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 TBRG1Q3YBR2 411 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 SLC36A2Q495M3 483 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 PHYHD1Q5SRE7 291 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 LRFN4Q6PJG9 635 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 NHLRC1Q6VVB1 395 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 FAM122BQ7Z309 247 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 DPPA2Q7Z7J5 298 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 TMEM200AQ86VY9 491 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 GLB1L2Q8IW92 636 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 DEPDC4Q8N2C3 294 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 PARP8Q8N3A8 854 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 LNX2Q8N448 690 aa12.16□□□□□ -0.46
TRAF4-215ENST00000584944 CBR4Q8N4T8 237 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms