RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 ACTR3P61158 418 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 CLINT1Q14677 625 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 PPP1R7Q15435 360 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 CERS6Q6ZMG9 384 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 TEX43Q6ZNM6 134 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 TAS2R42Q7RTR8 314 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 C15orf56Q8N910 161 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 PLPPR1Q8TBJ4 325 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 FBXO32Q969P5 355 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 SEH1LQ96EE3 360 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 TCHPQ9BT92 498 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 NECAP2Q9NVZ3 263 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 KLHL28Q9NXS3 571 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 MAPK8IP3Q9UPT6 1336 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 ARHGEF35A5YM69 484 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 C11orf94C9JXX5 98 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 CD5LO43866 347 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 CST1P01037 141 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 CCNB1P14635 433 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 CNR1P21554 472 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 HRH1P35367 487 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 RORCP51449 518 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 IRX3P78415 501 aaPredicted RBP2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 REG3AQ06141 175 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 PON3Q15166 354 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 TGFBIQ15582 683 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 POU2AF1Q16633 256 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 VPS26BQ4G0F5 336 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 THEM4Q5T1C6 240 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 TMEM107Q6UX40 140 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 ZNF493Q6ZR52 646 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 FAM92BQ6ZTR7 304 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 BHLHA15Q7RTS1 189 aaPredicted RBP2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 PDIK1LQ8N165 341 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 STPG2Q8N412 459 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 LIX1Q8N485 282 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 OR10R2Q8NGX6 335 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 UBALD1Q8TB05 177 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 CXorf40AQ8TE69 158 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 CREB3L1Q96BA8 519 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 BMFQ96LC9 184 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 OR2A5Q96R48 311 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 NOX3Q9HBY0 568 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 SLC40A1Q9NP59 571 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 SLCO1B3Q9NPD5 702 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 ZNF629Q9UEG4 869 aaPredicted RBP2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 HPCAL4Q9UM19 191 aa2.35□□□□□ -2.03
PPP4R1-227ENST00000583988 SLIT3O75094 1523 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 IGLV1-50A0A075B6I6 118 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 IGHV3-74A0A0B4J1X5 117 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 IGHV5-51A0A0C4DH38 117 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 LRCOL1A6NCL2 159 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 INS-IGF2F8WCM5 200 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 GOSR2O14653 212 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 SERPINA3P01011 423 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 ZNF43P17038 809 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 NAMPTP43490 491 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 SLC7A9P82251 487 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 C5orf47Q569G3 176 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 ANKRD22Q5VYY1 191 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 OR52W1Q6IF63 320 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 LINC00173Q6ZV60 143 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 FAM86B1Q8N7N1 296 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 SDR9C7Q8NEX9 313 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 OR56B2PQ8NGI1 322 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 OR2L8Q8NGY9 312 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 KCNG3Q8TAE7 436 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 SLC22A8Q8TCC7 542 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 SPIN2AQ99865 258 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 SPIN2BQ9BPZ2 258 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 NDFIP1Q9BT67 221 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 RACGAP1Q9H0H5 632 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 RPF2Q9H7B2 306 aaKnown RBP2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 INPP5EQ9NRR6 644 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 STARD10Q9Y365 291 aa2.34□□□□□ -2.03
PPP4R1-227ENST00000583988 MROH7-TTC4A0A0A0MT08 1334 aa2.34□□□□□ -2.04
PPP4R1-227ENST00000583988 XKRY2A2RUG3 117 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 CDC7O00311 574 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 KMOO15229 486 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 DFNA5O60443 496 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 EEDO75530 441 aaKnown RBP2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 CT62P0C5K7 136 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 CALM1P0DP23 149 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 CALM2P0DP24 149 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 CALM3P0DP25 149 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 TROVE2P10155 538 aaKnown RBP eCLIP2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 FOLR1P15328 257 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 PSMC3P17980 439 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 TNNI1P19237 187 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 RPS9P46781 194 aaKnown RBP2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 RFX3P48380 749 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 CCNHP51946 323 aaPredicted RBP2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 NCBP2P52298 156 aaKnown RBP eCLIP2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 ARG2P78540 354 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 ADARB1P78563 741 aaKnown RBP2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 FAM83EQ2M2I3 478 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 MAJINQ3KP22 176 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 RABL6Q3YEC7 729 aaPredicted RBP2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 CCNJQ5T5M9 372 aa2.33□□□□□ -2.04
PPP4R1-227ENST00000583988 HES5Q5TA89 166 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms