RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 H7C1C5 153 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 TNFRSF11BO00300 401 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 CD14P08571 375 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 PATE4P0C8F1 98 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 ZNF26P17031 533 aaPredicted RBP10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 CALCRP30988 508 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 TTKP33981 857 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 IFNGR2P38484 337 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 GIPRP48546 466 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 ATP5J2P56134 94 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 LCN6P62502 163 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 RAB1AP62820 205 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 C10orf128Q5T292 105 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 ZNF544Q6NX49 715 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 VHLLQ6RSH7 139 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 YTHDF3Q7Z739 585 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 ZER1Q7Z7L7 766 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 DTX2Q86UW9 622 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 MUC15Q8N387 334 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 CLDN22Q8N7P3 220 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 ARIH2OSQ8N7S6 290 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 WFDC11Q8NEX6 87 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 FNDC8Q8TC99 324 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 POP5Q969H6 163 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 SLC7A6OSQ96CW6 309 aaPredicted RBP10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 TRMT61AQ96FX7 289 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 Q96M85 177 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 ZNF570Q96NI8 536 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 RBP7Q96R05 134 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 GPA33Q99795 319 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 BTBD10Q9BSF8 475 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 RNF121Q9H920 327 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 SMURF2Q9HAU4 748 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 ZNF224Q9NZL3 707 aa10.95□□□□□ -0.66
SMARCE1-218ENST00000582955 IGKV1D-43A0A0B4J1Z2 117 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 XKRYO14609 159 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 ACOT8O14734 319 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 PTP4A3O75365 173 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 DNAJC8O75937 253 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 KRT36O76013 467 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 CD8AP01732 235 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 CDAP32320 146 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 MAGEA2P43356 314 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 ZNF133P52736 654 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 TRAP1Q12931 704 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 SGCAQ16586 387 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 SLC36A2Q495M3 483 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 THEM4Q5T1C6 240 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 TMEM53Q6P2H8 277 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 SMARCD3Q6STE5 483 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 THSD4Q6ZMP0 1018 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 SLC16A14Q7RTX9 510 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 KRTAP1-3Q8IUG1 177 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 LRRC18Q8N456 261 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 OR4F15Q8NGB8 312 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 FGFBP3Q8TAT2 258 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 FANK1Q8TC84 345 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 GNPDA2Q8TDQ7 276 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 NMD3Q96D46 503 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 KCNN2Q9H2S1 579 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 DENND2DQ9H6A0 471 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 CBLN4Q9NTU7 201 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 ZNF701Q9NV72 531 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 LYVE1Q9Y5Y7 322 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 F8P00451 2351 aa10.94□□□□□ -0.66
SMARCE1-218ENST00000582955 ARID1AO14497 2285 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 IGHV2OR16-5A0A0B4J2B6 119 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 TEX13CA0A0J9YWL9 993 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 A0A1W2PPL8 197 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 OVOL3O00110 214 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 SOCS2O14508 198 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 RAP2AP10114 183 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 CD99P14209 185 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 ZNF14P17017 642 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 NPR2P20594 1047 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 FPR3P25089 353 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 SDHAP31040 664 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 APOBEC3AP31941 199 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 GUCA1AP43080 201 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 RPS6KA3P51812 740 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 MRPS34P82930 218 aaKnown RBP10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 PPP1R8Q12972 351 aaKnown RBP10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 BNIP1Q12981 228 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 KRR1Q13601 381 aaKnown RBP10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 FLOT2Q14254 428 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 RAB39AQ14964 217 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 NRN1LQ496H8 165 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 MESTQ5EB52 335 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 GPR139Q6DWJ6 353 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 SLC25A47Q6Q0C1 308 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 FAM122BQ7Z309 247 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 DPPA2Q7Z7J5 298 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 SPATA24Q86W54 205 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 IL17RDQ8NFM7 739 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 OR9Q2Q8NGE9 314 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 RASD2Q96D21 266 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 FBXO17Q96EF6 278 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 Q96MF0 132 aa10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 GPX7Q96SL4 187 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-218ENST00000582955 CACNG6Q9BXT2 260 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms