RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 PEPDP12955 493 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 CCNA2P20248 432 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 PSMB9P28065 219 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 GTF2E2P29084 291 aaKnown RBP9.13□□□□□ -0.95
SS18-221ENST00000582448 SOX3P41225 446 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 APOBEC1P41238 236 aaKnown RBP9.13□□□□□ -0.95
SS18-221ENST00000582448 CDH11P55287 796 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 DLX5P56178 289 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 SUMO1P63165 101 aaKnown RBP9.13□□□□□ -0.95
SS18-221ENST00000582448 LTBQ06643 244 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 RAB40BQ12829 278 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 TBCEQ15813 527 aaPredicted RBP9.13□□□□□ -0.95
SS18-221ENST00000582448 SYT14P1Q58G82 188 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 ARMC4Q5T2S8 1044 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 ARSKQ6UWY0 536 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 B3GNT6Q6ZMB0 384 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 DPY19L2P2Q6ZN68 376 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 CXXC5Q7LFL8 322 aaKnown RBP9.13□□□□□ -0.95
SS18-221ENST00000582448 GPALPP1Q8IXQ4 340 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 LNX2Q8N448 690 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 OR4K17Q8NGC6 315 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 OR13F1Q8NGS4 319 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 OR4Q3Q8NH05 313 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 GPR119Q8TDV5 335 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 ZNF582Q96NG8 517 aaPredicted RBP9.13□□□□□ -0.95
SS18-221ENST00000582448 TNFRSF13CQ96RJ3 184 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 SMR3AQ99954 134 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 CDCA4Q9BXL8 241 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 FKBP14Q9NWM8 211 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 PAK1IP1Q9NWT1 392 aaPredicted RBP9.13□□□□□ -0.95
SS18-221ENST00000582448 HPF1Q9NWY4 346 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 IL20RAQ9UHF4 553 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 KLHL21Q9UJP4 597 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 ZNF229Q9UJW7 825 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 OSGIN1Q9UJX0 560 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 TMED7Q9Y3B3 224 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 WIF1Q9Y5W5 379 aa9.13□□□□□ -0.95
SS18-221ENST00000582448 PINLYPA6NC86 204 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 KDM4EB2RXH2 506 aaPredicted RBP9.12□□□□□ -0.95
SS18-221ENST00000582448 G3V3Y1 287 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 BHLHE40O14503 412 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 MYL12BO14950 172 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 SEC14L2O76054 403 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 OR6A2O95222 327 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 RAB36O95755 333 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 HTR1AP08908 422 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 DBTP11182 482 aaKnown RBP9.12□□□□□ -0.95
SS18-221ENST00000582448 FKBP2P26885 142 aaKnown RBP9.12□□□□□ -0.95
SS18-221ENST00000582448 ACVR2AP27037 513 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 CASP3P42574 277 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 KIR2DL3P43628 341 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 MTNR1AP48039 350 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 MASP1P48740 699 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 TMBIM6P55061 237 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 ADAM8P78325 824 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 ZNF91Q05481 1191 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 LGALS3BPQ08380 585 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 TMED1Q13445 227 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 MFSD13AQ14CX5 517 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 ZNF74Q16587 644 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 CNPY1Q3B7I2 92 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 ZNF791Q3KP31 576 aaPredicted RBP9.12□□□□□ -0.95
SS18-221ENST00000582448 GPR107Q5VW38 600 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 NXNL2Q5VZ03 156 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 XAF1Q6GPH4 301 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 IL20RBQ6UXL0 311 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 LIX1LQ8IVB5 337 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 OR10G3Q8NGC4 313 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 OR9Q1Q8NGQ5 310 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 RAB2BQ8WUD1 216 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 LIPHQ8WWY8 451 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 TMIGD2Q96BF3 282 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 DDIT4LQ96D03 193 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 RNFT2Q96EX2 444 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 SGCZQ96LD1 299 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 ERMAPQ96PL5 475 aaPredicted RBP9.12□□□□□ -0.95
SS18-221ENST00000582448 TSC22D3Q99576 134 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 TTYH2Q9BSA4 534 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 MND1Q9BWT6 205 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 YIPF3Q9GZM5 350 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 RACGAP1Q9H0H5 632 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 EXO5Q9H790 373 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 FKRPQ9H9S5 495 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 ACOT13Q9NPJ3 140 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 CMC2Q9NRP2 79 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 EDARQ9UNE0 448 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 RPH3AQ9Y2J0 694 aaPredicted RBP9.12□□□□□ -0.95
SS18-221ENST00000582448 GPR52Q9Y2T5 361 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 CEPT1Q9Y6K0 416 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 COMMD3-BMI1R4GMX3 469 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 HCFC1P51610 2035 aa9.12□□□□□ -0.95
SS18-221ENST00000582448 A0A087WZY1 265 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 IGLV3-32A0A0A0MS00 114 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 A0A0G2JNJ9 132 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 BLOC1S5-TXNDC5H3BN57 136 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 ACOT7O00154 380 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 SNX4O95219 450 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 PPP1R3DO95685 299 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 P04436 131 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms