RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 DENRO43583 198 aaKnown RBP8.4□□□□□ -1.06
RFFL-210ENST00000582308 SLC16A7O60669 478 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 WBP4O75554 376 aaKnown RBP8.4□□□□□ -1.06
RFFL-210ENST00000582308 SMNDC1O75940 238 aaKnown RBP eCLIP8.4□□□□□ -1.06
RFFL-210ENST00000582308 GYPBP06028 91 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 CD8BP10966 210 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 SPI1P17947 270 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 BMP5P22003 454 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 PAICSP22234 425 aaKnown RBP8.4□□□□□ -1.06
RFFL-210ENST00000582308 SLC2A5P22732 501 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 MYF6P23409 242 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 IL5RAQ01344 420 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 ROR2Q01974 943 aaKnown RBP8.4□□□□□ -1.06
RFFL-210ENST00000582308 FAPQ12884 760 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 CDK5R2Q13319 367 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 MAD2L1BPQ15013 274 aaPredicted RBP8.4□□□□□ -1.06
RFFL-210ENST00000582308 SLC25A30Q5SVS4 291 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 C10orf128Q5T292 105 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 LAIR2Q6ISS4 152 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 ZNF474Q6S9Z5 364 aaPredicted RBP8.4□□□□□ -1.06
RFFL-210ENST00000582308 THAP5Q7Z6K1 395 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 ZBTB46Q86UZ6 589 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 C8orf59Q8N0T1 100 aaPredicted RBP8.4□□□□□ -1.06
RFFL-210ENST00000582308 UBE2J2Q8N2K1 259 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 SETD9Q8NE22 299 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 OR51L1Q8NGJ5 315 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 FNDC8Q8TC99 324 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 APH1BQ8WW43 257 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 NSMAFQ92636 917 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 ZNF582Q96NG8 517 aaPredicted RBP8.4□□□□□ -1.06
RFFL-210ENST00000582308 ALKBH3Q96Q83 286 aaPredicted RBP8.4□□□□□ -1.06
RFFL-210ENST00000582308 ULBP2Q9BZM5 246 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 OR51V1Q9H2C8 321 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 RERGLQ9H628 205 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 CRLF2Q9HC73 371 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 UPB1Q9UBR1 384 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 MALT1Q9UDY8 824 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 ERRFI1Q9UJM3 462 aaPredicted RBP8.4□□□□□ -1.06
RFFL-210ENST00000582308 UGT2A1Q9Y4X1 527 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 PCDHGB5Q9Y5G0 923 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 FKBP7Q9Y680 259 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 HSPE1-MOB4S4R3N1 261 aa8.4□□□□□ -1.06
RFFL-210ENST00000582308 USP9XQ93008 2570 aaPredicted RBP8.4□□□□□ -1.07
RFFL-210ENST00000582308 CCDC182A6NF36 153 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 A8MXE2 369 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 ZNF587BE7ETH6 402 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 MSTNO14793 375 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 DHHO43323 396 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 MPZL2O60487 215 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 ENTPD6O75354 484 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 KHDRBS3O75525 346 aaKnown RBP8.39□□□□□ -1.07
RFFL-210ENST00000582308 KRT33AO76009 404 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 CNOT4O95628 575 aaKnown RBP8.39□□□□□ -1.07
RFFL-210ENST00000582308 GPANK1O95872 356 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 SCG5P05408 212 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 ITGA5P08648 1049 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 CRABP1P29762 137 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 CDAP32320 146 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 APOFQ13790 326 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 CDSNQ15517 529 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 OCLNQ16625 522 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 SMN1Q16637 294 aaKnown RBP8.39□□□□□ -1.07
RFFL-210ENST00000582308 CEACAM16Q2WEN9 425 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 LINC01590Q5TEZ4 76 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 NXNL2Q5VZ03 156 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 B3GLCTQ6Y288 498 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 Q6ZT83 130 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 GABRG1Q8N1C3 465 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 PROKR2Q8NFJ6 384 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 OR2T4Q8NH00 348 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 LILRB4Q8NHJ6 448 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 CNIH3Q8TBE1 160 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 HTRA1Q92743 480 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 CNBD2Q96M20 576 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 FOXN4Q96NZ1 517 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 RBM24Q9BX46 236 aaKnown RBP8.39□□□□□ -1.07
RFFL-210ENST00000582308 RACGAP1Q9H0H5 632 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 PIGMQ9H3S5 423 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 B3GAT2Q9NPZ5 323 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 CLN6Q9NWW5 311 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 JKAMPQ9P055 326 aa8.39□□□□□ -1.07
RFFL-210ENST00000582308 COA3Q9Y2R0 106 aaPredicted RBP8.39□□□□□ -1.07
RFFL-210ENST00000582308 EEF1E1-BLOC1S5C9J1V9 151 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 DVL2O14641 736 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 PRODHO43272 600 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 EEF1E1O43324 174 aaKnown RBP8.38□□□□□ -1.07
RFFL-210ENST00000582308 ZG16O60844 167 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 SEC14L2O76054 403 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 GLCEO94923 617 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 MPZL1O95297 269 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 NR2C1P13056 603 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 COX5AP20674 150 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 IGHV1-2P23083 117 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 MPGP29372 298 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 CHRNB4P30926 498 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 FMO3P31513 532 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 NUDT6P53370 316 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 ARF1P84077 181 aaKnown RBP8.38□□□□□ -1.07
RFFL-210ENST00000582308 KLHL12Q53G59 568 aa8.38□□□□□ -1.07
RFFL-210ENST00000582308 C9orf135Q5VTT2 229 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms