RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 ZNF83P51522 516 aa12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 BSPH1Q075Z2 132 aa12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 KRR1Q13601 381 aaKnown RBP12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 C20orf204Q6ZNR8 217 aa12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SLC22A24Q8N4F4 322 aa12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 DNAJC9Q8WXX5 260 aa12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 UTP4Q969X6 686 aaKnown RBP12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 ERMAPQ96PL5 475 aaPredicted RBP12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 HS3ST6Q96QI5 342 aa12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 BDH2Q9BUT1 245 aa12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 IFT27Q9BW83 186 aa12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SIAEQ9HAT2 523 aa12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 B3GNT2Q9NY97 397 aa12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 ADAM18Q9Y3Q7 739 aa12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 RTTNQ86VV8 2226 aa12.13□□□□□ -0.47
SNORD3B-1-201ENST00000577988 CREBBPQ92793 2442 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 DCHS2Q6V1P9 2916 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 TEX13CA0A0J9YWL9 993 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 A0A1W2PPR1 153 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SLC22A23A1A5C7 686 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 M0R1B8 84 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 B4GALT1P15291 398 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 FASP25445 335 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 ACTR3P61158 418 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 MYBPC1Q00872 1141 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 PPP1R8Q12972 351 aaKnown RBP12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 CCNIQ14094 377 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 ZFP1Q6P2D0 407 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 FOXL2NBQ6ZUU3 175 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 ZNF611Q8N823 705 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SAMD8Q96LT4 415 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SLC38A2Q96QD8 506 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 FEVQ99581 238 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 KCNS3Q9BQ31 491 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 KCNN2Q9H2S1 579 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 ZNF556Q9HAH1 456 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 VSX1Q9NZR4 365 aaPredicted RBP12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 PDP1Q9P0J1 537 aaPredicted RBP12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 ST6GALNAC2Q9UJ37 374 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 NBPF19A0A087WUL8 3843 aa12.12□□□□□ -0.47
SNORD3B-1-201ENST00000577988 RAI1Q7Z5J4 1906 aaPredicted RBP12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 ABCD4O14678 606 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 HS3ST1O14792 307 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 TIPRLO75663 272 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 PPP1R3DO95685 299 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 CRYAAP02489 173 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 RAF1P04049 648 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 DNASE1P24855 282 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 NOS3P29474 1203 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 CRABP1P29762 137 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 CAPZA2P47755 286 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 ATP6AP1Q15904 470 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 GSG1Q2KHT4 349 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SLC36A2Q495M3 483 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 MESTQ5EB52 335 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 FAM27BQ5VT28 67 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SHQ1Q6PI26 577 aaKnown RBP12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 DNM1P34Q6PK57 102 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 PAMR1Q6UXH9 720 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 CDH24Q86UP0 819 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 HIPK1Q86Z02 1210 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SKA3Q8IX90 412 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 OR5K1Q8NHB7 308 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 MBD6Q96DN6 1003 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 C1QTNF6Q9BXI9 259 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 NTN4Q9HB63 628 aa12.11□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SHISA9B4DS77 424 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SOCS2O14508 198 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 KHDRBS3O75525 346 aaKnown RBP12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SEC14L2O76054 403 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SLC2A10O95528 541 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 PLAUP00749 431 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 RENP00797 406 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 PTHP01270 115 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 CD79AP11912 226 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 IST1P53990 364 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 RAB1AP62820 205 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 GABPB1Q06547 395 aaPredicted RBP12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 ZNF672Q499Z4 452 aaPredicted RBP12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 TMEM53Q6P2H8 277 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SLC22A25Q6T423 547 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SLC16A14Q7RTX9 510 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 TMEM179BQ7Z7N9 219 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 SYT9Q86SS6 491 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 MDP1Q86V88 176 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 JAZF1Q86VZ6 243 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 LNX2Q8N448 690 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 NSMAFQ92636 917 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 AKAP1Q92667 903 aaKnown RBP eCLIP12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 PIGTQ969N2 578 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 FBXW5Q969U6 566 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 GTPBP3Q969Y2 492 aaKnown RBP12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 RASD2Q96D21 266 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 TSSK6Q9BXA6 273 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 C1orf198Q9H425 327 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 IL20RAQ9UHF4 553 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 UGT2A1Q9Y4X1 527 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 ARID1AO14497 2285 aa12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 ANKRD17O75179 2603 aaKnown RBP12.1□□□□□ -0.47
SNORD3B-1-201ENST00000577988 IGKV1D-43A0A0B4J1Z2 117 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms