RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 RORCP51449 518 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 CDH4P55283 916 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 FBXW4P57775 412 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 RPS21P63220 83 aaKnown RBP1.16□□□□□ -2.22
TOP2A-202ENST00000577541 HMGN5P82970 282 aaKnown RBP1.16□□□□□ -2.22
TOP2A-202ENST00000577541 IRF8Q02556 426 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 LRRC74AQ0VAA2 488 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 MRPL28Q13084 256 aaKnown RBP1.16□□□□□ -2.22
TOP2A-202ENST00000577541 SRSF5Q13243 272 aaKnown RBP1.16□□□□□ -2.22
TOP2A-202ENST00000577541 AQP6Q13520 282 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 CUL2Q13617 745 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 SGCAQ16586 387 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 ABCA11PQ4W5N1 156 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 SAMD4BQ5PRF9 694 aaKnown RBP1.16□□□□□ -2.22
TOP2A-202ENST00000577541 LRRC66Q68CR7 880 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 FRMPD2BQ6IN97 320 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 Q6ZR03 302 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 HMGN2P46Q86SG4 172 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 NBPF5PQ86XG9 351 aaPredicted RBP1.16□□□□□ -2.22
TOP2A-202ENST00000577541 CCDC50Q8IVM0 306 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 UBE2J2Q8N2K1 259 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 ARRDC1Q8N5I2 433 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 B3GNT7Q8NFL0 401 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 VN1R2Q8NFZ6 395 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 OR5B3Q8NH48 314 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 KCNG3Q8TAE7 436 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 SLC2A14Q8TDB8 520 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 PYROXD1Q8WU10 500 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 ELMO1Q92556 727 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 TMEM54Q969K7 222 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 ZNF707Q96C28 371 aaPredicted RBP1.16□□□□□ -2.22
TOP2A-202ENST00000577541 NEURL3Q96EH8 262 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 WFIKKN1Q96NZ8 548 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 ATP5SQ99766 215 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 SLC29A1Q99808 456 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 RIOK1Q9BRS2 568 aaKnown RBP1.16□□□□□ -2.22
TOP2A-202ENST00000577541 NUP58Q9BVL2 599 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 OSBPL11Q9BXB4 747 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 SIAEQ9HAT2 523 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 TUBG2Q9NRH3 451 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 NMRK1Q9NWW6 199 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 SLC25A37Q9NYZ2 338 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 BFARQ9NZS9 450 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 DEC1Q9P2X7 70 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 LSM7Q9UK45 103 aaKnown RBP1.16□□□□□ -2.22
TOP2A-202ENST00000577541 VANGL2Q9ULK5 521 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 ST3GAL6Q9Y274 331 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 STARD10Q9Y365 291 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 HEBP2Q9Y5Z4 205 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 TNS2Q63HR2 1409 aa1.15□□□□□ -2.22
TOP2A-202ENST00000577541 IGLV2-18A0A075B6J9 118 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 IGLV1-36A0A0B4J1U3 117 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 FAM240BA0A1B0GVZ2 78 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 SERTM2A0A1B0GWG4 89 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 FAM47DPA6NHR8 397 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 COLCA2A8K830 154 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 HIDE1A8MVS5 230 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 F6UB75 175 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 PSTPIP1O43586 416 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 SPAG7O75391 227 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 GNAO1P09471 354 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 IGHV3-43DP0DP04 118 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 ZNF30P17039 623 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 RORAP35398 523 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 AQP2P41181 271 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 NSG1P42857 185 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 GLP1RP43220 463 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 CRYBB2P43320 205 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 KIR3DL2P43630 455 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 GPR6P46095 362 aaPredicted RBP1.15□□□□□ -2.23
TOP2A-202ENST00000577541 GYG1P46976 350 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 NMUP48645 174 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 CRISP1P54107 249 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 CDH6P55285 790 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 ACTA2P62736 377 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 KCNJ2P63252 427 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 ACTG2P63267 376 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 ACTC1P68032 377 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 SELENBP1Q13228 472 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 RCAN2Q14206 197 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 GNMTQ14749 295 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 PON3Q15166 354 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 ZSCAN26Q16670 478 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 UBE2SQ16763 222 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 CHRFAM7AQ494W8 412 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 SLC8B1Q6J4K2 584 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 TMEM107Q6UX40 140 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 LYPD2Q6UXB3 125 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 PCP2Q8IVA1 136 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 TTC5Q8N0Z6 440 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 CYB561D1Q8N8Q1 229 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 ZNF709Q8N972 641 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 Q8N976 141 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 OR10G9Q8NGN4 311 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 OR2G2Q8NGZ5 317 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 NRGNQ92686 78 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 FRZBQ92765 325 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 EXOSC8Q96B26 276 aaKnown RBP1.15□□□□□ -2.23
TOP2A-202ENST00000577541 DNAJC19Q96DA6 116 aa1.15□□□□□ -2.23
TOP2A-202ENST00000577541 CCDC77Q9BR77 488 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms