RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 XAF1Q6GPH4 301 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 C5orf46Q6UWT4 87 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 Q6ZT83 130 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 SLC35D2Q76EJ3 337 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 BHLHA15Q7RTS1 189 aaPredicted RBP6.94□□□□□ -1.3
CCDC40-215ENST00000576033 ALDH16A1Q8IZ83 802 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 DEPDC4Q8N2C3 294 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 SCAIQ8N9R8 606 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 SYT14Q8NB59 555 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 OR8D4Q8NGM9 314 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 OR6S1Q8NH40 331 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 OR52N5Q8NH56 324 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 CNIH3Q8TBE1 160 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 SGCDQ92629 289 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 NEUROG1Q92886 237 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 KISS1RQ969F8 398 aaPredicted RBP6.94□□□□□ -1.3
CCDC40-215ENST00000576033 GTPBP3Q969Y2 492 aaKnown RBP6.94□□□□□ -1.3
CCDC40-215ENST00000576033 SPOCK3Q9BQ16 436 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 MED18Q9BUE0 208 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 SF3B5Q9BWJ5 86 aaKnown RBP6.94□□□□□ -1.3
CCDC40-215ENST00000576033 C1QTNF6Q9BXI9 259 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 SLC19A3Q9BZV2 496 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF556Q9HAH1 456 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 SLC25A19Q9HC21 320 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 GP6Q9HCN6 339 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 MALT1Q9UDY8 824 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 FOXD3Q9UJU5 478 aaPredicted RBP6.94□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF346Q9UL40 294 aaKnown RBP6.94□□□□□ -1.3
CCDC40-215ENST00000576033 BLOC1S6Q9UL45 172 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 SIGLEC7Q9Y286 467 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 B3GALT5Q9Y2C3 310 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 HIF3AQ9Y2N7 669 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 CORINQ9Y5Q5 1042 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 CEPT1Q9Y6K0 416 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 OTOGQ6ZRI0 2925 aa6.94□□□□□ -1.3
CCDC40-215ENST00000576033 CELSR1Q9NYQ6 3014 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 TEX13CA0A0J9YWL9 993 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 C16orf97H3BN30 126 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 GPR171O14626 319 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 SLC43A1O75387 559 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 TRMUO75648 421 aaKnown RBP6.93□□□□□ -1.3
CCDC40-215ENST00000576033 OR6A2O95222 327 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 PPP1R3DO95685 299 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 GPANK1O95872 356 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 CELA3BP08861 270 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 PATE4P0C8F1 98 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 PGA4P0DJD7 388 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 PGA3P0DJD8 388 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 PSMB1P20618 241 aaKnown RBP6.93□□□□□ -1.3
CCDC40-215ENST00000576033 GSTM3P21266 225 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 PCMT1P22061 227 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 IL32P24001 234 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 FPR3P25089 353 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 CDAP32320 146 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 TTKP33981 857 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 CTXN1P60606 82 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 SNRPGP62308 76 aaKnown RBP6.93□□□□□ -1.3
CCDC40-215ENST00000576033 SORDQ00796 357 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 IL5RAQ01344 420 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 TSPAN31Q12999 210 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 ITGADQ13349 1161 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 PTGES3Q15185 160 aaKnown RBP6.93□□□□□ -1.3
CCDC40-215ENST00000576033 GABRA6Q16445 453 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 CEACAM16Q2WEN9 425 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 ZBED5Q49AG3 693 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 MESTQ5EB52 335 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 CLEC12AQ5QGZ9 265 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 SLC25A30Q5SVS4 291 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 ARMC4Q5T2S8 1044 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 KLHL24Q6TFL4 600 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 BEND4Q6ZU67 534 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 OAFQ86UD1 273 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 TMEM200AQ86VY9 491 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 C20orf196Q8IYI0 205 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 SPARTQ8N0X7 666 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 WDR31Q8NA23 367 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 NOXO1Q8NFA2 376 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 OR13F1Q8NGS4 319 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 FGFBP3Q8TAT2 258 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF519Q8TB69 540 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 FANK1Q8TC84 345 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 TRUB1Q8WWH5 349 aaKnown RBP6.93□□□□□ -1.3
CCDC40-215ENST00000576033 IPCEF1Q8WWN9 437 aaPredicted RBP6.93□□□□□ -1.3
CCDC40-215ENST00000576033 UBE2FQ969M7 185 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 TMIGD2Q96BF3 282 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 DGCR14Q96DF8 476 aaKnown RBP6.93□□□□□ -1.3
CCDC40-215ENST00000576033 SAMD8Q96LT4 415 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 Q96M85 177 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 HS6ST2Q96MM7 605 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 DOK1Q99704 481 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 KATNB1Q9BVA0 655 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 FN3KQ9H479 309 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 CRLF2Q9HC73 371 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 GPR35Q9HC97 309 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 CCNB1IP1Q9NPC3 277 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 INIPQ9NRY2 104 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 ASB6Q9NWX5 421 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 ELOVL5Q9NYP7 299 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 UPB1Q9UBR1 384 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 NOX1Q9Y5S8 564 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms