RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 IL1RL1Q01638 556 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 ENDOGQ14249 297 aaKnown RBP7.5□□□□□ -1.21
SMG6-216ENST00000575176 TRIM25Q14258 630 aaKnown RBP7.5□□□□□ -1.21
SMG6-216ENST00000575176 ANKDD1AQ495B1 522 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 ZNF544Q6NX49 715 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 PGBD2Q6P3X8 592 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 ZNF730Q6ZMV8 503 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 ZNF620Q6ZNG0 422 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 FKBP9P1Q75LS8 142 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 PIAS4Q8N2W9 510 aaPredicted RBP7.5□□□□□ -1.21
SMG6-216ENST00000575176 SLC22A24Q8N4F4 322 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 SYT14Q8NB59 555 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 NUP37Q8NFH4 326 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 OR8D4Q8NGM9 314 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 OR51A7Q8NH64 312 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 TMEM171Q8WVE6 324 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 RASD2Q96D21 266 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 FBXO17Q96EF6 278 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 RSRC1Q96IZ7 334 aaKnown RBP7.5□□□□□ -1.21
SMG6-216ENST00000575176 RADILQ96JH8 1075 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 Q96M85 177 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 SMR3AQ99954 134 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 SH3GL3Q99963 347 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 ALG12Q9BV10 488 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 PLA2G12AQ9BZM1 189 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 MAGIXQ9H6Y5 334 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 CA10Q9NS85 328 aa7.5□□□□□ -1.21
SMG6-216ENST00000575176 ZNF346Q9UL40 294 aaKnown RBP7.5□□□□□ -1.21
SMG6-216ENST00000575176 ABCA1O95477 2261 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 TEX13CA0A0J9YWL9 993 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 A0A1W2PRG6 482 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 SLC22A23A1A5C7 686 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 GPRIN2O60269 458 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 ICMTO60725 284 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 SMPD2O60906 423 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 FABP3P05413 133 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 CD14P08571 375 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 GAAP10253 952 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 SAGP10523 405 aaPredicted RBP7.49□□□□□ -1.21
SMG6-216ENST00000575176 CTLA4P16410 223 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 CDAP32320 146 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 ARR3P36575 388 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 GIPRP48546 466 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 CTXN1P60606 82 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 ERVK-25P63136 954 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 SPIBQ01892 262 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 BNIP1Q12981 228 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 TOP3AQ13472 1001 aaPredicted RBP7.49□□□□□ -1.21
SMG6-216ENST00000575176 TAF11Q15544 211 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 EFNB3Q15768 340 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 ETFDHQ16134 617 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 GSG1Q2KHT4 349 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 ZBED5Q49AG3 693 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 MTX3Q5HYI7 312 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 FGD3Q5JSP0 725 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 ZNF362Q5T0B9 420 aaPredicted RBP7.49□□□□□ -1.21
SMG6-216ENST00000575176 SHEQ5VZ18 495 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 C1orf94Q6P1W5 598 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 SLC22A25Q6T423 547 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 KLHL17Q6TDP4 642 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 YTHDF3Q7Z739 585 aaKnown RBP7.49□□□□□ -1.21
SMG6-216ENST00000575176 TMEM179BQ7Z7N9 219 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 OAFQ86UD1 273 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 ZDHHC21Q8IVQ6 265 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 MUC15Q8N387 334 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 ARIH2OSQ8N7S6 290 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 CPEB3Q8NE35 698 aaKnown RBP7.49□□□□□ -1.21
SMG6-216ENST00000575176 OR9Q2Q8NGE9 314 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 OR6N1Q8NGY5 312 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 OR52J3Q8NH60 311 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 SLCO4A1Q96BD0 722 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 CCDC124Q96CT7 223 aaKnown RBP7.49□□□□□ -1.21
SMG6-216ENST00000575176 DDOQ99489 341 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 CACNG6Q9BXT2 260 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 CADM1Q9BY67 442 aaKnown RBP7.49□□□□□ -1.21
SMG6-216ENST00000575176 MUC13Q9H3R2 512 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 PLK3Q9H4B4 646 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 ZNF442Q9H7R0 627 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 CBLN4Q9NTU7 201 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 VSX1Q9NZR4 365 aaPredicted RBP7.49□□□□□ -1.21
SMG6-216ENST00000575176 IL20RAQ9UHF4 553 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 TMEM5Q9Y2B1 443 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 MALRD1Q5VYJ5 2156 aa7.49□□□□□ -1.21
SMG6-216ENST00000575176 IGLV1-36A0A0B4J1U3 117 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 TCRBV3S1A0A5B6 114 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 ZNF726A6NNF4 738 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 BHLHE40O14503 412 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 KRT33AO76009 404 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 OR6A2O95222 327 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 GADD45GO95257 159 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 SNAP29O95721 258 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 ANOS1P23352 680 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 SDHAP31040 664 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 THBS4P35443 961 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 ACVR1BP36896 505 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 WNT5AP41221 380 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 MNAT1P51948 309 aa7.48□□□□□ -1.21
SMG6-216ENST00000575176 UBE2NP61088 152 aaKnown RBP7.48□□□□□ -1.21
SMG6-216ENST00000575176 PPP1R8Q12972 351 aaKnown RBP7.48□□□□□ -1.21
SMG6-216ENST00000575176 KRR1Q13601 381 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms