RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 H3BN98 237 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 SOCS2O14508 198 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 SEC14L2O76054 403 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 PPP1R3DO95685 299 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 RENP00797 406 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZNF26P17031 533 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 ARR3P36575 388 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 IST1P53990 364 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 FXYD6P3P58550 94 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 BSPH1Q075Z2 132 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 KPNB1Q14974 876 aaKnown RBP11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 GSG1Q2KHT4 349 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 C3orf36Q3SXR2 165 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 SLC36A2Q495M3 483 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 MESTQ5EB52 335 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZDHHC13Q8IUH4 622 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 SVOPLQ8N434 492 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 OR5K1Q8NHB7 308 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 TEX47Q8TBZ9 253 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 NSMAFQ92636 917 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 RASD2Q96D21 266 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 SNX18Q96RF0 628 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 TEX12Q9BXU0 123 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 EGLN3Q9H6Z9 239 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 NPAP1Q9NZP6 1156 aa11.16□□□□□ -0.62
TRAPPC1-206ENST00000573989 DCHS2Q6V1P9 2916 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 SLC22A23A1A5C7 686 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 G3V2T6 193 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 ABCD4O14678 606 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 SIAH2O43255 324 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 SLC2A10O95528 541 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 RAB36O95755 333 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 CD79AP11912 226 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 CBR1P16152 277 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZNF23P17027 643 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 CD40P25942 277 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 CRABP1P29762 137 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 MRPS34P82930 218 aaKnown RBP11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 FMODQ06828 376 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZSCAN26Q16670 478 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 CLEC12AQ5QGZ9 265 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 TMEM53Q6P2H8 277 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 SLC25A47Q6Q0C1 308 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZNF704Q6ZNC4 412 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 SLC16A14Q7RTX9 510 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 TMEM179BQ7Z7N9 219 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 PIAS4Q8N2W9 510 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 IL17RDQ8NFM7 739 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 OR2T33Q8NG76 320 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 PYDC1Q8WXC3 89 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 CENPNQ96H22 339 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 SLC38A2Q96QD8 506 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 NIPSNAP1Q9BPW8 284 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 TSSK6Q9BXA6 273 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 C1QTNF6Q9BXI9 259 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 NELFAQ9H3P2 528 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 RNF121Q9H920 327 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 SEC61A2Q9H9S3 476 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 SIAEQ9HAT2 523 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 VSX1Q9NZR4 365 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 ENOPH1Q9UHY7 261 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 POU2F3Q9UKI9 436 aa11.15□□□□□ -0.62
TRAPPC1-206ENST00000573989 CADP27708 2225 aa11.15□□□□□ -0.63
TRAPPC1-206ENST00000573989 ITPR2Q14571 2701 aa11.15□□□□□ -0.63
TRAPPC1-206ENST00000573989 A0A1W2PPL8 197 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 DPRXA6NFQ7 191 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 H7C1C5 153 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 KHDRBS3O75525 346 aaKnown RBP11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 SOX14O95416 240 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 PTHP01270 115 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 IFNGP01579 166 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 IGKV3-15P01624 115 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 CRYAAP02489 173 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 HIST1H1CP16403 213 aaKnown RBP11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 LCN6P62502 163 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 RAB1AP62820 205 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 TUBA1BP68363 451 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 TUBA4AP68366 448 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 SGCAQ16586 387 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 SLC36A3Q495N2 470 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 LEG1Q6P5S2 330 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 SLC22A25Q6T423 547 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 SEZ6L2Q6UXD5 910 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 TUBA1AQ71U36 451 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 OR4K13Q8NH42 304 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 LRTOMTQ8WZ04 291 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 STMN2Q93045 179 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 NMD3Q96D46 503 aaKnown RBP11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 TMEM204Q9BSN7 226 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 WACQ9BTA9 647 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 OSBPL10Q9BXB5 764 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 SYT4Q9H2B2 425 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 NTN4Q9HB63 628 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 CCNB1IP1Q9NPC3 277 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 CRNNQ9UBG3 495 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 KLHL21Q9UJP4 597 aa11.14□□□□□ -0.63
TRAPPC1-206ENST00000573989 APCP25054 2843 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 ANKRD17O75179 2603 aaKnown RBP11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 BHLHE40O14503 412 aa11.13□□□□□ -0.63
TRAPPC1-206ENST00000573989 SLC16A7O60669 478 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms