RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 RBM15BQ8NDT2 890 aaKnown RBP11.83□□□□□ -0.52
RAB40B-204ENST00000571554 SLC30A7Q8NEW0 376 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 RP9Q8TA86 221 aaKnown RBP11.83□□□□□ -0.52
RAB40B-204ENST00000571554 HDAC2Q92769 488 aaKnown RBP11.83□□□□□ -0.52
RAB40B-204ENST00000571554 MSI2Q96DH6 328 aaKnown RBP11.83□□□□□ -0.52
RAB40B-204ENST00000571554 MRPL13Q9BYD1 178 aaKnown RBP11.83□□□□□ -0.52
RAB40B-204ENST00000571554 POLR2J2Q9GZM3 115 aaKnown RBP11.83□□□□□ -0.52
RAB40B-204ENST00000571554 POLR2J3Q9H1A7 115 aaKnown RBP11.83□□□□□ -0.52
RAB40B-204ENST00000571554 MYOZ1Q9NP98 299 aaPredicted RBP11.83□□□□□ -0.52
RAB40B-204ENST00000571554 REV1Q9UBZ9 1251 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 ATRQ13535 2644 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 TRAV27A0A087WT01 109 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 A0A1W2PPW3 197 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 M0R233 179 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 SYNGR3O43761 229 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 LMX1BO60663 402 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 CLPTM1O96005 669 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 NAT2P11245 290 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 NCK1P16333 377 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 IGFBP5P24593 272 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 LSP1P33241 339 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 GLRXP35754 106 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 GSK3BP49841 420 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 GZMKP49863 264 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 NUDT2P50583 147 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 ST3GAL3Q11203 375 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 TRIP10Q15642 601 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 FXNQ16595 210 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 ALG10Q5BKT4 473 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 ARMC4Q5T2S8 1044 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 NRMQ8IXM6 262 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 OR13C2Q8NGS9 318 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 OR51A7Q8NH64 312 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 UBASH3BQ8TF42 649 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 NEU4Q8WWR8 484 aaPredicted RBP11.82□□□□□ -0.52
RAB40B-204ENST00000571554 LZICQ8WZA0 190 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 BPIFA2Q96DR5 249 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 TSPAN32Q96QS1 320 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 SNX18Q96RF0 628 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 BEX2Q9BXY8 128 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 FAM107BQ9H098 131 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 CDH20Q9HBT6 801 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 MAN2C1Q9NTJ4 1040 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 SLC7A8Q9UHI5 535 aa11.82□□□□□ -0.52
RAB40B-204ENST00000571554 FFAR1O14842 300 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 SLC22A2O15244 555 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 SERPINA1P01009 418 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 HPXP02790 462 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 IFNW1P05000 195 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 LCKP06239 509 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 SAGP10523 405 aaPredicted RBP11.81□□□□□ -0.52
RAB40B-204ENST00000571554 THRBP10828 461 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 ZNF23P17027 643 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 CCNOP22674 350 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 APEX1P27695 318 aaKnown RBP11.81□□□□□ -0.52
RAB40B-204ENST00000571554 CTXN1P60606 82 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 RPS23P62266 143 aaKnown RBP11.81□□□□□ -0.52
RAB40B-204ENST00000571554 CCNIQ14094 377 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 SGCAQ16586 387 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 SLC36A2Q495M3 483 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 FAM166AQ6J272 317 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 TBPL2Q6SJ96 375 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 FKBP9P1Q75LS8 142 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 CXXC5Q7LFL8 322 aaKnown RBP11.81□□□□□ -0.52
RAB40B-204ENST00000571554 ARPINQ7Z6K5 226 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 OFCC1Q8IZS5 231 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 HSH2DQ96JZ2 352 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 SEPHS2Q99611 448 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 ELAC2Q9BQ52 826 aaKnown RBP11.81□□□□□ -0.52
RAB40B-204ENST00000571554 FNDC11Q9BVV2 318 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 SHARPINQ9H0F6 387 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 DENND2DQ9H6A0 471 aaPredicted RBP11.81□□□□□ -0.52
RAB40B-204ENST00000571554 NARFLQ9H6Q4 476 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 MED4Q9NPJ6 270 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 CDC42EP3Q9UKI2 254 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 FBXL3Q9UKT7 428 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 ZNF346Q9UL40 294 aaKnown RBP11.81□□□□□ -0.52
RAB40B-204ENST00000571554 KCNS2Q9ULS6 477 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 HIF3AQ9Y2N7 669 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 UGT2A1Q9Y4X1 527 aa11.81□□□□□ -0.52
RAB40B-204ENST00000571554 H7C1C5 153 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 CCDC22O60826 627 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 NCR1O76036 304 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 TGFAP01135 160 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 IGF2P01344 180 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 TSPAN19P0C672 248 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 FAM157CP0CG43 387 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 GPR4P46093 362 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 LCN6P62502 163 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 ERVK-25P63136 954 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 SRSF2Q01130 221 aaKnown RBP11.8□□□□□ -0.52
RAB40B-204ENST00000571554 HSF2Q03933 536 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 GLO1Q04760 184 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 TRAM2Q15035 370 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 TBC1D28Q2M2D7 210 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 IFI44LQ53G44 452 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 PABPC1L2AQ5JQF8 200 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 ELFN2Q5R3F8 820 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 C10orf128Q5T292 105 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 RGS7BPQ6MZT1 257 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms