RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ZNF83P51522 516 aa18.39■□□□□ 0.53
SHCBP1-205ENST00000566016 COX10Q12887 443 aa18.39■□□□□ 0.53
SHCBP1-205ENST00000566016 ADAM5Q6NVV9 412 aa18.39■□□□□ 0.53
SHCBP1-205ENST00000566016 SLC25A47Q6Q0C1 308 aa18.39■□□□□ 0.53
SHCBP1-205ENST00000566016 ZNF704Q6ZNC4 412 aaPredicted RBP18.39■□□□□ 0.53
SHCBP1-205ENST00000566016 OR52L1Q8NGH7 329 aa18.39■□□□□ 0.53
SHCBP1-205ENST00000566016 NANOS1Q8WY41 292 aaKnown RBP18.39■□□□□ 0.53
SHCBP1-205ENST00000566016 EDARQ9UNE0 448 aa18.39■□□□□ 0.53
SHCBP1-205ENST00000566016 IER3IP1Q9Y5U9 82 aa18.39■□□□□ 0.53
SHCBP1-205ENST00000566016 ARHGEF9O43307 516 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 TIPRLO75663 272 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 SLC2A10O95528 541 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 IGLV1-44P01699 117 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 OR8G3PP0DMU2 310 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 CD40P25942 277 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 MRPS34P82930 218 aaKnown RBP18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 MYBPC1Q00872 1141 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 FMODQ06828 376 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 ATP6AP1Q15904 470 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 DPPA2Q7Z7J5 298 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 TMEM179BQ7Z7N9 219 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 SLC22A24Q8N4F4 322 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 RASD2Q96D21 266 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 SAMD8Q96LT4 415 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 RAB3IPQ96QF0 476 aaPredicted RBP18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 SNX18Q96RF0 628 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 FEVQ99581 238 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 NTN4Q9HB63 628 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 B3GNT2Q9NY97 397 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 VSX1Q9NZR4 365 aaPredicted RBP18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 UGT2A1Q9Y4X1 527 aa18.38■□□□□ 0.53
SHCBP1-205ENST00000566016 SLC22A23A1A5C7 686 aa18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 FARS2O95363 451 aaKnown RBP18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 PPP1R3DO95685 299 aa18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 CBR1P16152 277 aa18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 NPR2P20594 1047 aa18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 ARR3P36575 388 aa18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 ARHGDIAP52565 204 aa18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 GABPB1Q06547 395 aaPredicted RBP18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 SHQ1Q6PI26 577 aaKnown RBP18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 PAMR1Q6UXH9 720 aa18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 FOXL2NBQ6ZUU3 175 aa18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 GTPBP3Q969Y2 492 aaKnown RBP18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 ERMAPQ96PL5 475 aaPredicted RBP18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 IFT27Q9BW83 186 aa18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 EGLN3Q9H6Z9 239 aa18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 ZNF224Q9NZL3 707 aa18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 PDP1Q9P0J1 537 aaPredicted RBP18.37■□□□□ 0.53
SHCBP1-205ENST00000566016 IGKV1D-43A0A0B4J1Z2 117 aa18.36■□□□□ 0.53
SHCBP1-205ENST00000566016 ZNF503-AS2A6NEH8 195 aa18.36■□□□□ 0.53
SHCBP1-205ENST00000566016 M0R1B8 84 aa18.36■□□□□ 0.53
SHCBP1-205ENST00000566016 BHLHE40O14503 412 aa18.36■□□□□ 0.53
SHCBP1-205ENST00000566016 ABCD4O14678 606 aa18.36■□□□□ 0.53
SHCBP1-205ENST00000566016 UBL3O95164 117 aa18.36■□□□□ 0.53
SHCBP1-205ENST00000566016 ANXA8P13928 327 aa18.36■□□□□ 0.53
SHCBP1-205ENST00000566016 FASP25445 335 aa18.36■□□□□ 0.53
SHCBP1-205ENST00000566016 NINJ1Q92982 152 aa18.36■□□□□ 0.53
SHCBP1-205ENST00000566016 SLC38A2Q96QD8 506 aa18.36■□□□□ 0.53
SHCBP1-205ENST00000566016 NIPSNAP1Q9BPW8 284 aa18.36■□□□□ 0.53
SHCBP1-205ENST00000566016 BDH2Q9BUT1 245 aa18.36■□□□□ 0.53
SHCBP1-205ENST00000566016 SOCS2O14508 198 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 TUBA1BP68363 451 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 TUBA4AP68366 448 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 KPNB1Q14974 876 aaKnown RBP18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 GSG1Q2KHT4 349 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 C20orf204Q6ZNR8 217 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 TUBA1AQ71U36 451 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 CDH24Q86UP0 819 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 C10orf67Q8IYJ2 551 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 DNAJC9Q8WXX5 260 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 NABP1Q96AH0 204 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 C1QTNF6Q9BXI9 259 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 PLA2G12AQ9BZM1 189 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 SIAEQ9HAT2 523 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 FBXL3Q9UKT7 428 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 BAIAP2Q9UQB8 552 aa18.35■□□□□ 0.53
SHCBP1-205ENST00000566016 IGHV1-18A0A0C4DH31 117 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 SHISA9B4DS77 424 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 H7C1C5 153 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 HS3ST1O14792 307 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 PLAUP00749 431 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 HLA-HP01893 362 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 TP53P04637 393 aaPredicted RBP18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 NOS3P29474 1203 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 CAPZA2P47755 286 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 LCN6P62502 163 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 ZFP1Q6P2D0 407 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 PTCHD4Q6ZW05 846 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 MDP1Q86V88 176 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 SKA3Q8IX90 412 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 LNX2Q8N448 690 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 OR8D4Q8NGM9 314 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 SYT4Q9H2B2 425 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 ZNF556Q9HAH1 456 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 TBC1D23Q9NUY8 699 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 ST6GALNAC2Q9UJ37 374 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 OTOGQ6ZRI0 2925 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 RTTNQ86VV8 2226 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 ARID1AO14497 2285 aa18.34■□□□□ 0.53
SHCBP1-205ENST00000566016 CDKN2AP42771 156 aaKnown RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms