RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 RIMS3Q9UJD0 308 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 SH3GLB1Q9Y371 365 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 LRP5LA4QPB2 252 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 MCIDASD6RGH6 385 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 KPNA4O00629 521 aaPredicted RBP10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 OR7A10O76100 309 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 ZNF250P15622 560 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 H2AFXP16104 143 aaPredicted RBP10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 GPR6P46095 362 aaPredicted RBP10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 ARFIP2P53365 341 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 DVL1P1P54792 670 aaPredicted RBP10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 UGT2B15P54855 530 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 CDH15P55291 814 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 UCP2P55851 309 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 RPL18Q07020 188 aaKnown RBP10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 MSMPQ1L6U9 139 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 TBC1D28Q2M2D7 210 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 CR1LQ2VPA4 569 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 PCGF3Q3KNV8 242 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 ANKDD1AQ495B1 522 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 FAM209AQ5JX71 171 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 ELFN2Q5R3F8 820 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 C10orf128Q5T292 105 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 TSPYL5Q86VY4 417 aaPredicted RBP10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 RFLNBQ8N5W9 214 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 OR4K5Q8NGD3 323 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 FGFBP3Q8TAT2 258 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 SH3GL3Q99963 347 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 SYT3Q9BQG1 590 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 ZNF416Q9BWM5 594 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 TMEM120AQ9BXJ8 343 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 CDH20Q9HBT6 801 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 NKIRAS2Q9NYR9 191 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 MED31Q9Y3C7 131 aa10.46□□□□□ -0.73
GTF3C1-204ENST00000564664 IGLV3-9A0A075B6K5 115 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 A0A1W2PPW3 197 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 SLC22A2O15244 555 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 TRMUO75648 421 aaKnown RBP10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 TFP02787 698 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 MT-ND5P03915 603 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 PATE4P0C8F1 98 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 COL8A2P25067 703 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 KDELR2P33947 212 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 ALDH3B1P43353 468 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 KLF3P57682 345 aaPredicted RBP10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 SELENOWP63302 87 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 MRPS34P82930 218 aaKnown RBP10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 TEKQ02763 1124 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 ST3GAL3Q11203 375 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 KLF10Q13118 480 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 PIN1Q13526 163 aaPredicted RBP10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 MELKQ14680 651 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 RABL3Q5HYI8 236 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 RBM15BQ8NDT2 890 aaKnown RBP10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 NOXO1Q8NFA2 376 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 SYNPRQ8TBG9 265 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 C10orf82Q8WW14 230 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 ASB10Q8WXI3 467 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 LZICQ8WZA0 190 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 SNX18Q96RF0 628 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 SOX7Q9BT81 388 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 WACQ9BTA9 647 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 RACGAP1Q9H0H5 632 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 TXNIPQ9H3M7 391 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 TPK1Q9H3S4 243 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 HINT3Q9NQE9 182 aaKnown RBP10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 SAR1AQ9NR31 198 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 SVEP1Q4LDE5 3571 aa10.45□□□□□ -0.74
GTF3C1-204ENST00000564664 C17orf100A8MU93 164 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 FAM220BPB1ANY3 271 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 FXYD1O00168 92 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 MRASO14807 208 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 HPXP02790 462 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 F13BP05160 661 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 MMP7P09237 267 aaPredicted RBP10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 ANPEPP15144 967 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 APLNRP35414 380 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 AQP2P41181 271 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 GUCA1AP43080 201 aaPredicted RBP10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 SEC24CP53992 1094 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 RUNX1T1Q06455 604 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 SCGB2A2Q13296 93 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 NKPD1Q17RQ9 610 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 CYBRD1Q53TN4 286 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 THEM4Q5T1C6 240 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 ARMC4Q5T2S8 1044 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 FAM205BPQ63HN1 556 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 TMEM154Q6P9G4 183 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 DEF8Q6ZN54 512 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 LRP11Q86VZ4 500 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 NKAIN4Q8IVV8 208 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 RNF113BQ8IZP6 322 aaKnown RBP10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 TEX29Q8N6K0 151 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 SYT14Q8NB59 555 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 TMEM255BQ8WV15 326 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 SNX33Q8WV41 574 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 RBP7Q96R05 134 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 ZNF347Q96SE7 839 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 ALG12Q9BV10 488 aa10.44□□□□□ -0.74
GTF3C1-204ENST00000564664 TAAR3PQ9P1P4 343 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms