RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 C17orf67Q0P5P2 114 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 ITGADQ13349 1161 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 GPR68Q15743 365 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 TOMM34Q15785 309 aaPredicted RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 CTF1Q16619 201 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 NDUFAF6Q330K2 333 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 GLIPR1L2Q4G1C9 344 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 EIPR1Q53HC9 387 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 SLC25A53Q5H9E4 307 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 GCNT6Q5T4J0 391 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 RTL6Q6ICC9 239 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 OR5M10Q6IEU7 315 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 ARSKQ6UWY0 536 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 ZNF836Q6ZNA1 936 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 CCDC80Q76M96 950 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 C16orf62Q7Z3J2 963 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 MTERF4Q7Z6M4 381 aaKnown RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 NFE4Q86UQ8 179 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 VRK2Q86Y07 508 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 EPHX4Q8IUS5 362 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 GRAMD2AQ8IUY3 354 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 GATSQ8NAP1 163 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 CCDC197Q8NCU1 140 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 FAM83FQ8NEG4 500 aaPredicted RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 GPR32P1Q8NGA4 272 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 OR4D11Q8NGI4 311 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 OR1J4Q8NGS1 313 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 OR10A6Q8NH74 314 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 NFKBIDQ8NI38 313 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 BBS10Q8TAM1 723 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 GPR119Q8TDV5 335 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 TAMM41Q96BW9 452 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 ZNF597Q96LX8 424 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 ARPC5LQ9BPX5 153 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 CSTL1Q9H114 145 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 DEFB127Q9H1M4 99 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 DSN1Q9H410 356 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 RAD21L1Q9H4I0 556 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 ZNF696Q9H7X3 374 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 MTHFD2LQ9H903 347 aaPredicted RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 EFCAB1Q9HAE3 211 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 EXOSC3Q9NQT5 275 aaKnown RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 EXD2Q9NVH0 621 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 THUMPD1Q9NXG2 353 aaKnown RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 KLRF1Q9NZS2 232 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 MED11Q9P086 117 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 TMEM181Q9P2C4 612 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 P2RX2Q9UBL9 471 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 CD300AQ9UGN4 299 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 TINAGQ9UJW2 476 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 BOKQ9UMX3 212 aaPredicted RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 NPIPA1Q9UND3 350 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 WDR45Q9Y484 360 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 PCDHGB3Q9Y5G1 929 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 MMP24Q9Y5R2 645 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 NCOA6Q14686 2063 aaPredicted RBP4.02□□□□□ -1.77
SMG1-206ENST00000562668 ARHGAP21Q5T5U3 1957 aa4.02□□□□□ -1.77
SMG1-206ENST00000562668 ZNF407Q9C0G0 2248 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 A0A1B0GTH9 108 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 OR2M5A3KFT3 312 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 PRORSD1PA6NEY8 169 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 ANKUB1A6NFN9 424 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 EVPLLA8MZ36 301 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 FAM220BPB1ANY3 271 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 FAAHO00519 579 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 NDUFAB1O14561 156 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 AP3D1O14617 1153 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 ZNF264O43296 627 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 EIF4E2O60573 245 aaKnown RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 HCN1O60741 890 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 LYPD3O95274 346 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 AMBPP02760 352 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 THY1P04216 161 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 DBIP07108 87 aaKnown RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 STSP08842 583 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 RNF224P0DH78 156 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 NR2F1P10589 423 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 PRG2P13727 222 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 ETS2P15036 469 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 DPP4P27487 766 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 GDF1P27539 372 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 PCGF2P35227 344 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 KRT20P35900 424 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 ACAA2P42765 397 aaKnown RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 GSK3BP49841 420 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 LHX2P50458 406 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 NUDT2P50583 147 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 P2RX1P51575 399 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 SLC7A2P52569 658 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 ZNF136P52737 540 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 CRISP3P54108 245 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 DSCR4P56555 118 aaPredicted RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 CLDN18P56856 261 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 KCNJ10P78508 379 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 LIPEQ05469 1076 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 RBBP4Q09028 425 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 CEACAM7Q14002 265 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 SCARB2Q14108 478 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 VEZF1Q14119 521 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 NPTX1Q15818 432 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms