RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 RFKQ969G6 155 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 MBD6Q96DN6 1003 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 OPALINQ96PE5 141 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 TRIM2Q9C040 744 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 TMEM185BQ9H7F4 350 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 MEPEQ9NQ76 525 aaPredicted RBP8.09□□□□□ -1.11
IDH3A-217ENST00000559889 PMF1-BGLAPU3KQ54 211 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 MED13LQ71F56 2210 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 SERINC4A6NH21 518 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 CLDN25C9JDP6 229 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 TNFSF11O14788 317 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 CHP2O43745 196 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 SCG5P05408 212 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 PSMA1P25786 263 aaKnown RBP8.09□□□□□ -1.11
IDH3A-217ENST00000559889 SHC1P29353 583 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 NOS3P29474 1203 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 PRKCDQ05655 676 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 RAB40BQ12829 278 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 FOXF1Q12946 379 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 ITGADQ13349 1161 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 FGFBP1Q14512 234 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 TOMM34Q15785 309 aaPredicted RBP8.09□□□□□ -1.11
IDH3A-217ENST00000559889 SSX1Q16384 188 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 SGCBQ16585 318 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 KLHL12Q53G59 568 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 PLBD1Q6P4A8 553 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 ZNF550Q7Z398 422 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 PROKR2Q8NFJ6 384 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 PHOSPHO1Q8TCT1 267 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 GATAD2BQ8WXI9 593 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 TMEM203Q969S6 136 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 SLIRPQ9GZT3 109 aaKnown RBP8.09□□□□□ -1.11
IDH3A-217ENST00000559889 HOXD1Q9GZZ0 328 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 MED20Q9H944 212 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 HMG20AQ9NP66 347 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 PLSCR4Q9NRQ2 329 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 NDRG3Q9UGV2 375 aa8.09□□□□□ -1.11
IDH3A-217ENST00000559889 DIMT1Q9UNQ2 313 aaKnown RBP8.09□□□□□ -1.11
IDH3A-217ENST00000559889 DEFB108AA8MXU0 73 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 GTPBP1O00178 669 aaKnown RBP8.08□□□□□ -1.12
IDH3A-217ENST00000559889 CXCL13O43927 109 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 SS18L1O75177 396 aaPredicted RBP8.08□□□□□ -1.12
IDH3A-217ENST00000559889 LYPD3O95274 346 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 HMGN1P05114 100 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 FCGR2AP12318 317 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 PAICSP22234 425 aaKnown RBP8.08□□□□□ -1.12
IDH3A-217ENST00000559889 IDUAP35475 653 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 SLC9A3P48764 834 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 FXYD6P3P58550 94 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 RPS7P62081 194 aaKnown RBP8.08□□□□□ -1.12
IDH3A-217ENST00000559889 TUBA1BP68363 451 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 ZNF141Q15928 474 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 TIMM50Q3ZCQ8 353 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 ULK3Q6PHR2 472 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 THSD4Q6ZMP0 1018 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 ESPNLQ6ZVH7 1005 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 TUBA1AQ71U36 451 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 CXXC5Q7LFL8 322 aaKnown RBP8.08□□□□□ -1.12
IDH3A-217ENST00000559889 ZNF527Q8NB42 609 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 KBTBD8Q8NFY9 601 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 OR9Q1Q8NGQ5 310 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 TMUB1Q9BVT8 246 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 HINT3Q9NQE9 182 aaKnown RBP8.08□□□□□ -1.12
IDH3A-217ENST00000559889 ELOVL5Q9NYP7 299 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 OSGIN1Q9UJX0 560 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 CLEC4AQ9UMR7 237 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 LSM2Q9Y333 95 aaKnown RBP8.08□□□□□ -1.12
IDH3A-217ENST00000559889 SPIN1Q9Y657 262 aaPredicted RBP8.08□□□□□ -1.12
IDH3A-217ENST00000559889 ZC3H12DA2A288 527 aaKnown RBP8.08□□□□□ -1.12
IDH3A-217ENST00000559889 LRRN3E7EW58 273 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 RAF1P04049 648 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 TSPAN19P0C672 248 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 DNASE1P24855 282 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 EIF1P41567 113 aaKnown RBP8.08□□□□□ -1.12
IDH3A-217ENST00000559889 P2RX1P51575 399 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 ZNF404Q494X3 552 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 SNX29P2Q8IUI4 249 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 OR51G2Q8NGK0 314 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 OR2V1Q8NHB1 315 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 GPR119Q8TDV5 335 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 GMPPAQ96IJ6 420 aaPredicted RBP8.08□□□□□ -1.12
IDH3A-217ENST00000559889 TNFRSF13CQ96RJ3 184 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 OR51V1Q9H2C8 321 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 PAQR5Q9NXK6 330 aaPredicted RBP8.08□□□□□ -1.12
IDH3A-217ENST00000559889 SIGLEC7Q9Y286 467 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 TMEM5Q9Y2B1 443 aa8.08□□□□□ -1.12
IDH3A-217ENST00000559889 C16orf97H3BN30 126 aa8.07□□□□□ -1.12
IDH3A-217ENST00000559889 ETV2O00321 342 aaPredicted RBP8.07□□□□□ -1.12
IDH3A-217ENST00000559889 GPX5O75715 221 aa8.07□□□□□ -1.12
IDH3A-217ENST00000559889 PPP1R3DO95685 299 aa8.07□□□□□ -1.12
IDH3A-217ENST00000559889 PRKCAP17252 672 aa8.07□□□□□ -1.12
IDH3A-217ENST00000559889 CALRP27797 417 aaKnown RBP8.07□□□□□ -1.12
IDH3A-217ENST00000559889 ADH6P28332 368 aa8.07□□□□□ -1.12
IDH3A-217ENST00000559889 SUMO3P55854 103 aaPredicted RBP8.07□□□□□ -1.12
IDH3A-217ENST00000559889 WNT4P56705 351 aa8.07□□□□□ -1.12
IDH3A-217ENST00000559889 ZNF846Q147U1 533 aa8.07□□□□□ -1.12
IDH3A-217ENST00000559889 AADACL4Q5VUY2 407 aa8.07□□□□□ -1.12
IDH3A-217ENST00000559889 NXNL2Q5VZ03 156 aa8.07□□□□□ -1.12
IDH3A-217ENST00000559889 HBMQ6B0K9 141 aa8.07□□□□□ -1.12
IDH3A-217ENST00000559889 TMPRSS11FQ6ZWK6 438 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms