RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 ZNF35P13682 527 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 HSD17B1P14061 328 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 ZNF14P17017 642 aaPredicted RBP4.98□□□□□ -1.61
USP3-215ENST00000559771 ITGA2P17301 1181 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 NPR2P20594 1047 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 NR4A1P22736 598 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 COL8A2P25067 703 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 CDH15P55291 814 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 DSTNP60981 165 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 UBE2NP61088 152 aaKnown RBP4.98□□□□□ -1.61
USP3-215ENST00000559771 GNA13Q14344 377 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 RGNQ15493 299 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 ADRM1Q16186 407 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 FXNQ16595 210 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 IQCCQ4KMZ1 466 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 LIN52Q52LA3 116 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 PDCD4Q53EL6 469 aaKnown RBP4.98□□□□□ -1.61
USP3-215ENST00000559771 IZUMO2Q6UXV1 221 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 ZNF627Q7L945 461 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 ABHD12BQ7Z5M8 362 aaPredicted RBP4.98□□□□□ -1.61
USP3-215ENST00000559771 MDP1Q86V88 176 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 LRP11Q86VZ4 500 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 MEX3DQ86XN8 651 aaKnown RBP4.98□□□□□ -1.61
USP3-215ENST00000559771 ZNF584Q8IVC4 421 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 AQP12AQ8IXF9 295 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 C20orf196Q8IYI0 205 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 PACRGLQ8N7B6 248 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 TRIML2Q8N7C3 387 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.98□□□□□ -1.61
USP3-215ENST00000559771 SEMA6DQ8NFY4 1073 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 OR4F15Q8NGB8 312 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 GTF2H4Q92759 462 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 SLC25A36Q96CQ1 311 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 RCN3Q96D15 328 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 SLC41A3Q96GZ6 507 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 OXGR1Q96P68 337 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 TAPBPLQ9BX59 468 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 MRPL37Q9BZE1 423 aaKnown RBP4.98□□□□□ -1.61
USP3-215ENST00000559771 CRLF2Q9HC73 371 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 A4GALTQ9NPC4 353 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 SLC52A3Q9NQ40 469 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 ARMC1Q9NVT9 282 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 SLC25A37Q9NYZ2 338 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 ZIM2Q9NZV7 527 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 SLAMF8Q9P0V8 285 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 MYEF2Q9P2K5 600 aaKnown RBP4.98□□□□□ -1.61
USP3-215ENST00000559771 ABCD2Q9UBJ2 740 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 P2RX2Q9UBL9 471 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 CD300AQ9UGN4 299 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 TMEFF2Q9UIK5 374 aaPredicted RBP4.98□□□□□ -1.61
USP3-215ENST00000559771 PCDHB14Q9Y5E9 798 aa4.98□□□□□ -1.61
USP3-215ENST00000559771 PKD1L1Q8TDX9 2849 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 TRBV5-3A0A0A0MS03 114 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 SMIM31A0A1B0GVY4 71 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 A0A1B0GWA3 101 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 TCRBV3S1A0A5B6 114 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 SH3PXD2BA1X283 911 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 OR6C65A6NJZ3 312 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 VGLL3A8MV65 326 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 ZNF99A8MXY4 864 aaPredicted RBP4.97□□□□□ -1.61
USP3-215ENST00000559771 FAM157AC9JC47 383 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 LRRN3E7EW58 273 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 MRASO14807 208 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 ANGPT2O15123 496 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 FBXO24O75426 580 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 SLC22A3O75751 556 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 KRT33AO76009 404 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 NCR1O76036 304 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 VENTXO95231 258 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 AHSA1O95433 338 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 HPXP02790 462 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 BGLAPP02818 100 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 IL6P05231 212 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 LYNP07948 512 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 ZNF43P17038 809 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 CBLP22681 906 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 PAX7P23759 505 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 APEX1P27695 318 aaKnown RBP4.97□□□□□ -1.61
USP3-215ENST00000559771 GRPRP30550 384 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 ARR3P36575 388 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 CRATP43155 626 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 ANXA11P50995 505 aaKnown RBP4.97□□□□□ -1.61
USP3-215ENST00000559771 CHN2P52757 468 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 CRISP3P54108 245 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 DVL1P1P54792 670 aaPredicted RBP4.97□□□□□ -1.61
USP3-215ENST00000559771 COPZ1P61923 177 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 LMO4P61968 165 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 POU3F1Q03052 451 aaPredicted RBP4.97□□□□□ -1.61
USP3-215ENST00000559771 LRRC74AQ0VAA2 488 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 SNTB2Q13425 540 aaKnown RBP4.97□□□□□ -1.61
USP3-215ENST00000559771 NKPD1Q17RQ9 610 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 AGKQ53H12 422 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 ZNF311Q5JNZ3 666 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 REP15Q6BDI9 236 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 KRT80Q6KB66 452 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 TMEM154Q6P9G4 183 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 SLC2A7Q6PXP3 512 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 WDR88Q6ZMY6 472 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 DEF8Q6ZN54 512 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 H1FNTQ75WM6 255 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms