RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ALPK2Q86TB3 2170 aa7.1□□□□□ -1.27
SNX1-207ENST00000559401 SETD2Q9BYW2 2564 aaPredicted RBP7.1□□□□□ -1.27
SNX1-207ENST00000559401 IQCMA0A1B0GVH7 501 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 A0A1W2PPL8 197 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 SH3PXD2BA1X283 911 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 A6NIZ1 184 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 NPIPB13A6NJU9 1138 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 B2RBV5 119 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 CENPBD1B2RD01 187 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 NPIPB4C9JG80 1138 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 H7C1C5 153 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 PRSS23O95084 383 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 FAM107AO95990 144 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 ERCC1P07992 297 aaPredicted RBP7.09□□□□□ -1.27
SNX1-207ENST00000559401 HSD17B1P14061 328 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 ZNF14P17017 642 aaPredicted RBP7.09□□□□□ -1.27
SNX1-207ENST00000559401 ITGA2P17301 1181 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 RHCEP18577 417 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 PCSK6P29122 969 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 CDAP32320 146 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 GUCA1AP43080 201 aaPredicted RBP7.09□□□□□ -1.27
SNX1-207ENST00000559401 SLC9A3P48764 834 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 EFNA4P52798 201 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 RAP1BP61224 184 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 LCN6P62502 163 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 RAP1AP62834 184 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 ERVK-25P63136 954 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 VLDLRP98155 873 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 PPP2R2BQ00005 443 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 HSF2Q03933 536 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 PLP2Q04941 152 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 HIST3H3Q16695 136 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 ANKDD1AQ495B1 522 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 ARMC4Q5T2S8 1044 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 FAM205BPQ63HN1 556 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 PODNL1Q6PEZ8 512 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 CYP2R1Q6VVX0 501 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 ZNF627Q7L945 461 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 FITM2Q8N6M3 262 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 ANKS4BQ8N8V4 417 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 CCDC197Q8NCU1 140 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 ICA1LQ8NDH6 482 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 SLC30A7Q8NEW0 376 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 NUP37Q8NFH4 326 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 FGFBP3Q8TAT2 258 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 SLC7A13Q8TCU3 470 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 FAM168AQ92567 244 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 PYURFQ96I23 114 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 SORCS2Q96PQ0 1159 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 TSPAN32Q96QS1 320 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 MRPL13Q9BYD1 178 aaKnown RBP7.09□□□□□ -1.27
SNX1-207ENST00000559401 OR51B6Q9H340 312 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 PLK3Q9H4B4 646 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 RERGLQ9H628 205 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 DENND2DQ9H6A0 471 aaPredicted RBP7.09□□□□□ -1.27
SNX1-207ENST00000559401 ZNF442Q9H7R0 627 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 GORASP2Q9H8Y8 452 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 ZNF224Q9NZL3 707 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 NDUFAF4Q9P032 175 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 GRHPRQ9UBQ7 328 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 ZNF346Q9UL40 294 aaKnown RBP7.09□□□□□ -1.27
SNX1-207ENST00000559401 CMAHPQ9Y471 501 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 CR1P17927 2039 aa7.09□□□□□ -1.27
SNX1-207ENST00000559401 ARFGEF3Q5TH69 2177 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 IGHV4-30-2A0A087WSY4 118 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 TRBV4-1A0A0J9YWV2 114 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 A0A1W2PRQ8 180 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 XKRYO14609 159 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 CDC42EP2O14613 210 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 GPRIN2O60269 458 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 NDUFB2O95178 105 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 GADD45GO95257 159 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 PTHP01270 115 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 IGHMP01871 453 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 SERPINA5P05154 406 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 FABP3P05413 133 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 CSF3P09919 207 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 TSPAN19P0C672 248 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 FAM157BP0CG42 384 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 CCL2P13500 99 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 CCNOP22674 350 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 NR4A1P22736 598 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 APLNRP35414 380 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 SMIM11AP58511 58 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 DSCR9P59020 149 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 RPS23P62266 143 aaKnown RBP7.08□□□□□ -1.28
SNX1-207ENST00000559401 MRPS34P82930 218 aaKnown RBP7.08□□□□□ -1.28
SNX1-207ENST00000559401 DGCR6Q14129 220 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 EFNB3Q15768 340 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 SWI5Q1ZZU3 235 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 TBC1D28Q2M2D7 210 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 MST1LQ2TV78 715 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 ZBED5Q49AG3 693 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 C10orf128Q5T292 105 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 TMPRSS11FQ6ZWK6 438 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 TSEN54Q7Z6J9 526 aaKnown RBP7.08□□□□□ -1.28
SNX1-207ENST00000559401 DPPA2Q7Z7J5 298 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 CLDN22Q8N7P3 220 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 OR1J2Q8NGS2 313 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 FNDC8Q8TC99 324 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms