RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 SORCS2Q96PQ0 1159 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 TSPAN32Q96QS1 320 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 SH3GL3Q99963 347 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 GORASP2Q9H8Y8 452 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 NMNAT1Q9HAN9 279 aaPredicted RBP9.47□□□□□ -0.89
SPG11-216ENST00000559347 SMURF2Q9HAU4 748 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 NDUFAF4Q9P032 175 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 CD300AQ9UGN4 299 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 FBXL3Q9UKT7 428 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 PMF1-BGLAPU3KQ54 211 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 IGHV4-30-2A0A087WSY4 118 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 A0A096LNT2 108 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 IGKV1D-43A0A0B4J1Z2 117 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 A0A1W2PRQ8 180 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 B9A039 149 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 hCG_2039718K7EN88 272 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 LY6HO94772 140 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 FARS2O95363 451 aaKnown RBP9.46□□□□□ -0.9
SPG11-216ENST00000559347 H1F0P07305 194 aaKnown RBP9.46□□□□□ -0.9
SPG11-216ENST00000559347 PATE4P0C8F1 98 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 NR2C1P13056 603 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 ZNF35P13682 527 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 RHCEP18577 417 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 THBS4P35443 961 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 LIMS1P48059 325 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 PPOXP50336 477 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 RPL27P61353 136 aaKnown RBP9.46□□□□□ -0.9
SPG11-216ENST00000559347 CD47Q08722 323 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 DAG1Q14118 895 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 DGCR6Q14129 220 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 RAB39AQ14964 217 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 IQCCQ4KMZ1 466 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 FGD3Q5JSP0 725 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 SAMD4BQ5PRF9 694 aaKnown RBP9.46□□□□□ -0.9
SPG11-216ENST00000559347 FAM205BPQ63HN1 556 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 CLEC2AQ6UVW9 174 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 C16orf89Q6UX73 402 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 TMPRSS11FQ6ZWK6 438 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 OAFQ86UD1 273 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 FITM2Q8N6M3 262 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 OR51A7Q8NH64 312 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 ZNF519Q8TB69 540 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 NABP1Q96AH0 204 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 FAM46AQ96IP4 442 aaKnown RBP9.46□□□□□ -0.9
SPG11-216ENST00000559347 DHRS1Q96LJ7 313 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 ALG12Q9BV10 488 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 REG4Q9BYZ8 158 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 PLK3Q9H4B4 646 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 NDE1Q9NXR1 346 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 TMEM5Q9Y2B1 443 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 UGT2A1Q9Y4X1 527 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 FKBP7Q9Y680 259 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 V9GYQ6 96 aa9.46□□□□□ -0.9
SPG11-216ENST00000559347 TRBV4-1A0A0J9YWV2 114 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 GPRIN2O60269 458 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 GMNNO75496 209 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 DIRAS1O95057 198 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 FAM107AO95990 144 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 SERPINA5P05154 406 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 ZNF26P17031 533 aaPredicted RBP9.45□□□□□ -0.9
SPG11-216ENST00000559347 NPR2P20594 1047 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 NR4A1P22736 598 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 MSX2P35548 267 aaPredicted RBP9.45□□□□□ -0.9
SPG11-216ENST00000559347 EFNA4P52798 201 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 CTXN1P60606 82 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 MRPS34P82930 218 aaKnown RBP9.45□□□□□ -0.9
SPG11-216ENST00000559347 MXRA7P84157 204 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 SEC23BQ15437 767 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 MSMPQ1L6U9 139 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 SLC36A2Q495M3 483 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 PODNL1Q6PEZ8 512 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 SLC25A47Q6Q0C1 308 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 SLC16A14Q7RTX9 510 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 DPPA2Q7Z7J5 298 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 CDK20Q8IZL9 346 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 DEFB107AQ8IZN7 70 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 SVOPLQ8N434 492 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 CLDN22Q8N7P3 220 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 OR10H5Q8NGA6 315 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 NSMCE2Q96MF7 247 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 TNFRSF13CQ96RJ3 184 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 CCT8L2Q96SF2 557 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 CDRT15Q96T59 188 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 ZNF346Q9UL40 294 aaKnown RBP9.45□□□□□ -0.9
SPG11-216ENST00000559347 ADAM18Q9Y3Q7 739 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 CSPG4Q6UVK1 2322 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 HIVEP2P31629 2446 aa9.45□□□□□ -0.9
SPG11-216ENST00000559347 ABCA2Q9BZC7 2435 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 A6NIZ1 184 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 MMP7P09237 267 aaPredicted RBP9.44□□□□□ -0.9
SPG11-216ENST00000559347 CSF3P09919 207 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 CDAP32320 146 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 OMPP47874 163 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 DSCR9P59020 149 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 RAP1BP61224 184 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 RAP1AP62834 184 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 GALK2Q01415 458 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 KRT72Q14CN4 511 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 SPATS1Q496A3 300 aa9.44□□□□□ -0.9
SPG11-216ENST00000559347 ZBED5Q49AG3 693 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms