RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 DHHO43323 396 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 PRKYO43930 277 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 IGHV3-9P01782 118 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 QDPRP09417 244 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 IGFBP2P18065 325 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 NOS3P29474 1203 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 CD79BP40259 229 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 VHLP40337 213 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 AQP4P55087 323 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 SH3BGRP55822 239 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 CLRN1P58418 232 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 SNRPGP62308 76 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 LCN6P62502 163 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 GABRA6Q16445 453 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 KCNMB1Q16558 191 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 SFRP5Q5T4F7 317 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 C1QTNF12Q5T7M4 302 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 LINC01590Q5TEZ4 76 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 AADACL4Q5VUY2 407 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 LEG1Q6P5S2 330 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 OR6V1Q8N148 313 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 SYT14Q8NB59 555 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 OR52E2Q8NGJ4 325 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 TMEM163Q8TC26 289 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 FBLIM1Q8WUP2 373 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 ZNRF4Q8WWF5 429 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 NABP1Q96AH0 204 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 ALKBH3Q96Q83 286 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 ADI1Q9BV57 179 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 NUAK2Q9H093 628 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 CRLF2Q9HC73 371 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 HINT3Q9NQE9 182 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 ZNF226Q9NYT6 803 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 TAS2R16Q9NYV7 291 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 B9D1Q9UPM9 204 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 ITPR2Q14571 2701 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 ZNF587BE7ETH6 402 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 M0R3G1 203 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 IFNGP01579 166 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 GAAP10253 952 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 MRPS34P82930 218 aaKnown RBP13□□□□□ -0.33
SNRPA1-207ENST00000559309 SORDQ00796 357 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 ROR2Q01974 943 aaKnown RBP13□□□□□ -0.33
SNRPA1-207ENST00000559309 FAPQ12884 760 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 CEACAM16Q2WEN9 425 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 ZNF691Q5VV52 312 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 CARD17Q5XLA6 110 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 SEZ6L2Q6UXD5 910 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 ABHD12BQ7Z5M8 362 aaPredicted RBP13□□□□□ -0.33
SNRPA1-207ENST00000559309 LUZP2Q86TE4 346 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 GPR137CQ8N3F9 429 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 OR8J1Q8NGP2 316 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 OR6N1Q8NGY5 312 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 RHOXF1Q8NHV9 184 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 BCL2L2Q92843 193 aaPredicted RBP13□□□□□ -0.33
SNRPA1-207ENST00000559309 RNASE6Q93091 150 aaKnown RBP13□□□□□ -0.33
SNRPA1-207ENST00000559309 TSSK2Q96PF2 358 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 RBP7Q96R05 134 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 ULBP2Q9BZM5 246 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 VCXQ9H320 206 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 VCX3BQ9H321 246 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 MARCH7Q9H992 704 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 NPDC1Q9NQX5 325 aaPredicted RBP13□□□□□ -0.33
SNRPA1-207ENST00000559309 GALNT8Q9NY28 637 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 TVP23BQ9NYZ1 205 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 ZNF224Q9NZL3 707 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 CREBBPQ92793 2442 aa13□□□□□ -0.33
SNRPA1-207ENST00000559309 CENPEQ02224 2701 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 NKX2-6A6NCS4 301 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 RIIAD1A6NNX1 92 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 PRODHO43272 600 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 SMNDC1O75940 238 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 HOXB1P14653 301 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 ZNF3P17036 446 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 SPI1P17947 270 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 CRABP1P29762 137 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 CAPGP40121 348 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 ISL1P61371 349 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 FAM27E3Q08E93 113 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 IL18R1Q13478 541 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 ETFDHQ16134 617 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 SNAPC1Q16533 368 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 PCK2Q16822 640 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 TTC23Q5W5X9 447 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 JAZF1Q86VZ6 243 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 CXorf67Q86X51 503 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 ENTHD1Q8IYW4 607 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 C17orf78Q8N4C9 275 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 DHRSXQ8N5I4 330 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 CYB561A3Q8NBI2 242 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 OR1K1Q8NGR3 316 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 SSC4DQ8WTU2 575 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 CA5BP1Q8WTZ4 195 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 UBE2FQ969M7 185 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 SLC38A2Q96QD8 506 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 RBM24Q9BX46 236 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 HDHD5Q9BXW7 423 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 PRRG3Q9BZD7 231 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 KCNJ16Q9NPI9 418 aa12.99□□□□□ -0.33
SNRPA1-207ENST00000559309 B3GAT2Q9NPZ5 323 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms