RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 UNC79Q9P2D8 2635 aa9.52□□□□□ -0.88
TPM1-217ENST00000559108 CELSR2Q9HCU4 2923 aa9.52□□□□□ -0.88
TPM1-217ENST00000559108 IGLV1-36A0A0B4J1U3 117 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 TUBAL3A6NHL2 446 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 ZNF99A8MXY4 864 aaPredicted RBP9.52□□□□□ -0.89
TPM1-217ENST00000559108 KRT33AO76009 404 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 MPZL1O95297 269 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 BAG2O95816 211 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 CELA3BP08861 270 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 CLUP10909 449 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 GSTM3P21266 225 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 IL32P24001 234 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 POU1F1P28069 291 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 PEX2P28328 305 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 KIR2DL3P43628 341 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 CDK5Q00535 292 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.52□□□□□ -0.89
TPM1-217ENST00000559108 COX10Q12887 443 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 DAG1Q14118 895 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 TAF11Q15544 211 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 STK11Q15831 433 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 LPCAT4Q643R3 524 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 GPR139Q6DWJ6 353 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 ALKBH2Q6NS38 261 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 LEG1Q6P5S2 330 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 FOXL2NBQ6ZUU3 175 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 WFDC8Q8IUA0 241 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 SKA3Q8IX90 412 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 OR6V1Q8N148 313 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 PARP8Q8N3A8 854 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 SVOPLQ8N434 492 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 SLC37A3Q8NCC5 494 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 C1orf162Q8NEQ5 155 aaPredicted RBP9.52□□□□□ -0.89
TPM1-217ENST00000559108 OR52E2Q8NGJ4 325 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 OR9Q1Q8NGQ5 310 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 NRG4Q8WWG1 115 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 FOXB1Q99853 325 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 ALG12Q9BV10 488 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 RBM4Q9BWF3 364 aaKnown RBP9.52□□□□□ -0.89
TPM1-217ENST00000559108 C1QTNF6Q9BXI9 259 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 NMNAT2Q9BZQ4 307 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 NUAK2Q9H093 628 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 SLC25A19Q9HC21 320 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 KRT84Q9NSB2 600 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 USE1Q9NZ43 259 aa9.52□□□□□ -0.89
TPM1-217ENST00000559108 CIB4A0PJX0 185 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 FAM221AA4D161 298 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 A6NIZ1 184 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 OR6C65A6NJZ3 312 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 FAM183AA6NL82 134 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 FAM171A2A8MVW0 826 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 CENPBD1B2RD01 187 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 H3BN98 237 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 HLA-HP01893 362 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 GYPBP06028 91 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 GAAP10253 952 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 IGFBP5P24593 272 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 PYCR1P32322 319 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 GIPRP48546 466 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 RPS6KA3P51812 740 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 CRISP1P54107 249 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 RAP1BP61224 184 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 RAP1AP62834 184 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 ENDOGQ14249 297 aaKnown RBP9.51□□□□□ -0.89
TPM1-217ENST00000559108 MEP1BQ16820 701 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 FAM205BPQ63HN1 556 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 ZNF584Q8IVC4 421 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 BBS1Q8NFJ9 593 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 STEAP2Q8NFT2 490 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 OR2T33Q8NG76 320 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 OR52L1Q8NGH7 329 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 TEX47Q8TBZ9 253 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 DACH2Q96NX9 599 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 SH3GL3Q99963 347 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 MED18Q9BUE0 208 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 GABARAPL3Q9BY60 117 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 OR10A4Q9H209 315 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 EMC7Q9NPA0 242 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 RPRD1BQ9NQG5 326 aaKnown RBP9.51□□□□□ -0.89
TPM1-217ENST00000559108 B3GNT2Q9NY97 397 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 KIF17Q9P2E2 1029 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 POFUT2Q9Y2G5 429 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 COA3Q9Y2R0 106 aaPredicted RBP9.51□□□□□ -0.89
TPM1-217ENST00000559108 CENPEQ02224 2701 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 ABCA4P78363 2273 aa9.51□□□□□ -0.89
TPM1-217ENST00000559108 RTTNQ86VV8 2226 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 ARPC4-TTLL3A0A0A6YYG9 625 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.5□□□□□ -0.89
TPM1-217ENST00000559108 DPRXA6NFQ7 191 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 ZAR1LA6NP61 321 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 SURF4O15260 269 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 MGRN1O60291 552 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 SLC16A7O60669 478 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 PLAUP00749 431 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 TFP02787 698 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 HRGP04196 525 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 EPXP11678 715 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 COX6B1P14854 86 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 CRYGSP22914 178 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 GRK5P34947 590 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms