RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 A8MX80 341 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 A8MXK9 166 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 TOR1AO14656 332 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 ZMPSTE24O75844 475 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 RHOCP08134 193 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 DUX4L2P0CJ85 424 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 DUX4L3P0CJ86 424 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 DUX4L4P0CJ87 422 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 DUX4L5P0CJ88 424 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 DUX4L6P0CJ89 424 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 DUX4L7P0CJ90 424 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 CALM1P0DP23 149 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 CALM2P0DP24 149 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 CALM3P0DP25 149 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 CD40LGP29965 261 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 BTDP43251 543 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 CCR8P51685 355 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 BLVRAP53004 296 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 PLTPP55058 493 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 ERVK11-1P61568 191 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 VSNL1P62760 191 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 CYLC2Q14093 348 aaPredicted RBP3.01□□□□□ -1.93
TDP1-217ENST00000557782 TNXAQ16473 311 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 C5orf64Q2M2E5 130 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 EOGTQ5NDL2 527 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 UTF1Q5T230 341 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 ADAM5Q6NVV9 412 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 WDR74Q6RFH5 385 aaPredicted RBP3.01□□□□□ -1.93
TDP1-217ENST00000557782 DUX4L9Q6RFH8 374 aaPredicted RBP3.01□□□□□ -1.93
TDP1-217ENST00000557782 REG3GQ6UW15 175 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 PEX26Q7Z412 305 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 TMEM150AQ86TG1 271 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 VKORC1L1Q8N0U8 176 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 KIF2BQ8N4N8 673 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 CCDC71LQ8N9Z2 235 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 OR4Q3Q8NH05 313 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 OR51F2Q8NH61 342 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 FAM76AQ8TAV0 307 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 ACOT11Q8WXI4 607 aaPredicted RBP3.01□□□□□ -1.93
TDP1-217ENST00000557782 BAALCQ8WXS3 180 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 FRAT1Q92837 279 aaPredicted RBP3.01□□□□□ -1.93
TDP1-217ENST00000557782 EEF1AKMT3Q96AZ1 226 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 FGGYQ96C11 551 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 ZNF501Q96CX3 271 aaPredicted RBP3.01□□□□□ -1.93
TDP1-217ENST00000557782 DUS3LQ96G46 650 aaKnown RBP3.01□□□□□ -1.93
TDP1-217ENST00000557782 FAM210AQ96ND0 272 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 ANGPTL4Q9BY76 406 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 HES7Q9BYE0 225 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 GOLGA2P5Q9HBQ8 144 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 CTPS2Q9NRF8 586 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 TREM2Q9NZC2 230 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 RNF7Q9UBF6 113 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 DUX4Q9UBX2 424 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 MRM2Q9UI43 246 aaKnown RBP3.01□□□□□ -1.93
TDP1-217ENST00000557782 PSMD13Q9UNM6 376 aa3.01□□□□□ -1.93
TDP1-217ENST00000557782 JCADQ9P266 1359 aa3□□□□□ -1.93
TDP1-217ENST00000557782 ZNF816-ZNF321PA0A0X1KG74 233 aa3□□□□□ -1.93
TDP1-217ENST00000557782 PSMB11A5LHX3 300 aa3□□□□□ -1.93
TDP1-217ENST00000557782 HACD1B0YJ81 288 aa3□□□□□ -1.93
TDP1-217ENST00000557782 GOLGA8RI6L899 631 aa3□□□□□ -1.93
TDP1-217ENST00000557782 INSIG1O15503 277 aa3□□□□□ -1.93
TDP1-217ENST00000557782 SCN2BO60939 215 aa3□□□□□ -1.93
TDP1-217ENST00000557782 SC5DO75845 299 aa3□□□□□ -1.93
TDP1-217ENST00000557782 ZFAND5O76080 213 aa3□□□□□ -1.93
TDP1-217ENST00000557782 TDP2O95551 362 aa3□□□□□ -1.93
TDP1-217ENST00000557782 IGLV2-11P01706 119 aa3□□□□□ -1.93
TDP1-217ENST00000557782 ARG1P05089 322 aa3□□□□□ -1.93
TDP1-217ENST00000557782 MELTFP08582 738 aa3□□□□□ -1.93
TDP1-217ENST00000557782 TACSTD2P09758 323 aa3□□□□□ -1.93
TDP1-217ENST00000557782 OCMP0CE72 109 aaPredicted RBP3□□□□□ -1.93
TDP1-217ENST00000557782 SNHG28P0DPA3 235 aa3□□□□□ -1.93
TDP1-217ENST00000557782 CDK4P11802 303 aa3□□□□□ -1.93
TDP1-217ENST00000557782 GFAPP14136 432 aa3□□□□□ -1.93
TDP1-217ENST00000557782 ZNF250P15622 560 aa3□□□□□ -1.93
TDP1-217ENST00000557782 IGLL1P15814 213 aa3□□□□□ -1.93
TDP1-217ENST00000557782 PSMB6P28072 239 aa3□□□□□ -1.93
TDP1-217ENST00000557782 UGT2B10P36537 528 aa3□□□□□ -1.93
TDP1-217ENST00000557782 P2RY2P41231 377 aa3□□□□□ -1.93
TDP1-217ENST00000557782 GLP1RP43220 463 aa3□□□□□ -1.93
TDP1-217ENST00000557782 GPR6P46095 362 aaPredicted RBP3□□□□□ -1.93
TDP1-217ENST00000557782 DNASE1L1P49184 302 aa3□□□□□ -1.93
TDP1-217ENST00000557782 HMGA2P52926 109 aa3□□□□□ -1.93
TDP1-217ENST00000557782 SUB1P53999 127 aaKnown RBP eCLIP3□□□□□ -1.93
TDP1-217ENST00000557782 NANOS3P60323 173 aaKnown RBP3□□□□□ -1.93
TDP1-217ENST00000557782 SELENOTP62341 195 aa3□□□□□ -1.93
TDP1-217ENST00000557782 SLC35B1P78383 322 aa3□□□□□ -1.93
TDP1-217ENST00000557782 RPL36AP83881 106 aaKnown RBP3□□□□□ -1.93
TDP1-217ENST00000557782 ZNF92Q03936 586 aa3□□□□□ -1.93
TDP1-217ENST00000557782 FCHO2Q0JRZ9 810 aa3□□□□□ -1.93
TDP1-217ENST00000557782 TWF1Q12792 350 aa3□□□□□ -1.93
TDP1-217ENST00000557782 PDIA2Q13087 525 aaKnown RBP3□□□□□ -1.93
TDP1-217ENST00000557782 NRF1Q16656 503 aa3□□□□□ -1.93
TDP1-217ENST00000557782 C5orf47Q569G3 176 aa3□□□□□ -1.93
TDP1-217ENST00000557782 PAGE2BQ5JRK9 111 aa3□□□□□ -1.93
TDP1-217ENST00000557782 NHLRC3Q5JS37 347 aa3□□□□□ -1.93
TDP1-217ENST00000557782 ZNF691Q5VV52 312 aa3□□□□□ -1.93
TDP1-217ENST00000557782 AP1ARQ63HQ0 302 aa3□□□□□ -1.93
TDP1-217ENST00000557782 C1orf94Q6P1W5 598 aa3□□□□□ -1.93
TDP1-217ENST00000557782 UNC93AQ86WB7 457 aa3□□□□□ -1.93
TDP1-217ENST00000557782 C17orf82Q86X59 251 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms