RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 C3orf36Q3SXR2 165 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 FAM205BPQ63HN1 556 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 SMARCD3Q6STE5 483 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 PAMR1Q6UXH9 720 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 DPY19L2P2Q6ZN68 376 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 ZNF704Q6ZNC4 412 aaPredicted RBP8.41□□□□□ -1.06
SRP54-210ENST00000556380 HDDC2Q7Z4H3 204 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 TMEM179BQ7Z7N9 219 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 CDH24Q86UP0 819 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 SPATA24Q86W54 205 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 CCDC36Q8IYA8 594 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 LINC00471Q8N535 108 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 CLDN22Q8N7P3 220 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 NOXO1Q8NFA2 376 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 GNPDA2Q8TDQ7 276 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 NEUROG1Q92886 237 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 Q96M85 177 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 ZNF75AQ96N20 296 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 ALG12Q9BV10 488 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 SMURF2Q9HAU4 748 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 NTN4Q9HB63 628 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 TMEM38BQ9NVV0 291 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.41□□□□□ -1.06
SRP54-210ENST00000556380 STX18Q9P2W9 335 aaKnown RBP8.41□□□□□ -1.06
SRP54-210ENST00000556380 ST6GALNAC2Q9UJ37 374 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 POFUT2Q9Y2G5 429 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 ADAM18Q9Y3Q7 739 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 RNF115Q9Y4L5 304 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 MAGED1Q9Y5V3 778 aaPredicted RBP8.41□□□□□ -1.06
SRP54-210ENST00000556380 VPS13CQ709C8 3753 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 ARID1AO14497 2285 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 USF3Q68DE3 2245 aa8.41□□□□□ -1.06
SRP54-210ENST00000556380 PRRC2AP48634 2157 aaKnown RBP8.4□□□□□ -1.06
SRP54-210ENST00000556380 IGHV1-18A0A0C4DH31 117 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 A6NIZ1 184 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 AHCYL1O43865 530 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 SEC14L2O76054 403 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 CCNB2O95067 398 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 ATE1O95260 518 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 WNT11O96014 354 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 CST1P01037 141 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 IGKV3-15P01624 115 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 HLA-HP01893 362 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 APEHP13798 732 aaKnown RBP8.4□□□□□ -1.06
SRP54-210ENST00000556380 CBR1P16152 277 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 CD53P19397 219 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 PTAFRP25105 342 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 RPL4P36578 427 aaKnown RBP8.4□□□□□ -1.06
SRP54-210ENST00000556380 IST1P53990 364 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 CLRN1P58418 232 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 RAP1BP61224 184 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 RAP1AP62834 184 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 TUBA1BP68363 451 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 TUBA4AP68366 448 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 MYBPC1Q00872 1141 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 TOP3AQ13472 1001 aaPredicted RBP8.4□□□□□ -1.06
SRP54-210ENST00000556380 CCNIQ14094 377 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 TESK1Q15569 626 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 NRN1LQ496H8 165 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 MESTQ5EB52 335 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 THEM4Q5T1C6 240 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 FBXW10Q5XX13 1052 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 KLHL17Q6TDP4 642 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 KLHL24Q6TFL4 600 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 TMEM108Q6UXF1 575 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 ZNF813Q6ZN06 617 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 CCDC121Q6ZUS5 278 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 TUBA1AQ71U36 451 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 SKA3Q8IX90 412 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 OR9Q2Q8NGE9 314 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 FGFBP3Q8TAT2 258 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 NINJ1Q92982 152 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 NABP1Q96AH0 204 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 MBD6Q96DN6 1003 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 DUS3LQ96G46 650 aaKnown RBP8.4□□□□□ -1.06
SRP54-210ENST00000556380 SAMD8Q96LT4 415 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 FOXB1Q99853 325 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 DGCR6LQ9BY27 220 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 REEP1Q9H902 201 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 NOX3Q9HBY0 568 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 KRCC1Q9NPI7 259 aaPredicted RBP8.4□□□□□ -1.06
SRP54-210ENST00000556380 IL20Q9NYY1 176 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 IL20RAQ9UHF4 553 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 SAMHD1Q9Y3Z3 626 aaKnown RBP8.4□□□□□ -1.06
SRP54-210ENST00000556380 U3KQV3 271 aa8.4□□□□□ -1.06
SRP54-210ENST00000556380 ACANP16112 2415 aa8.4□□□□□ -1.07
SRP54-210ENST00000556380 SLC22A23A1A5C7 686 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 PRSS37A4D1T9 235 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 ADARB2-AS1A8MUL3 147 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 M0R1B8 84 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 EBAG9O00559 213 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 ABCD4O14678 606 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 IMPA2O14732 288 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 HS3ST1O14792 307 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 ARPC3O15145 178 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 SLC2A10O95528 541 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 RAF1P04049 648 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 TP53P04637 393 aaPredicted RBP8.39□□□□□ -1.07
SRP54-210ENST00000556380 CELA3BP08861 270 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 B4GALT1P15291 398 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms