RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 SLC7A6OSQ96CW6 309 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-217ENST00000556203 NMD3Q96D46 503 aaKnown RBP13.2□□□□□ -0.3
ACTN1-217ENST00000556203 SH3GL3Q99963 347 aa13.2□□□□□ -0.3
ACTN1-217ENST00000556203 GRHPRQ9UBQ7 328 aa13.2□□□□□ -0.3
ACTN1-217ENST00000556203 TMCC3Q9ULS5 477 aa13.2□□□□□ -0.3
ACTN1-217ENST00000556203 ADAM18Q9Y3Q7 739 aa13.2□□□□□ -0.3
ACTN1-217ENST00000556203 CADP27708 2225 aa13.2□□□□□ -0.3
ACTN1-217ENST00000556203 KRT36O76013 467 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 RAB36O95755 333 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 IFNGR2P38484 337 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 CDKN1AP38936 164 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 GIPRP48546 466 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 ATP5J2P56134 94 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 CHRNB3Q05901 458 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 TRAP1Q12931 704 aaKnown RBP13.19□□□□□ -0.3
ACTN1-217ENST00000556203 BNIP1Q12981 228 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 NRN1LQ496H8 165 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 FAM98BQ52LJ0 330 aaKnown RBP13.19□□□□□ -0.3
ACTN1-217ENST00000556203 SLC25A47Q6Q0C1 308 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 ARIH2OSQ8N7S6 290 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 FGFBP3Q8TAT2 258 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 POP5Q969H6 163 aaKnown RBP13.19□□□□□ -0.3
ACTN1-217ENST00000556203 Q96M85 177 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 RBP7Q96R05 134 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 GPX7Q96SL4 187 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-217ENST00000556203 BTBD10Q9BSF8 475 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 TRIM15Q9C019 465 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 SMURF2Q9HAU4 748 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 CBLN4Q9NTU7 201 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 IL20RAQ9UHF4 553 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 LYVE1Q9Y5Y7 322 aa13.19□□□□□ -0.3
ACTN1-217ENST00000556203 IGHV2OR16-5A0A0B4J2B6 119 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 TEX13CA0A0J9YWL9 993 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 H7C1C5 153 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 TNFRSF11BO00300 401 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 XKRYO14609 159 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 FPR3P25089 353 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 CDAP32320 146 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 FXYD6P3P58550 94 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 LCN6P62502 163 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 RAB1AP62820 205 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 MESTQ5EB52 335 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 THEM4Q5T1C6 240 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 PGM2L1Q6PCE3 622 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 VHLLQ6RSH7 139 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 SMARCD3Q6STE5 483 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 THSD4Q6ZMP0 1018 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 SLC16A14Q7RTX9 510 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 FAM122BQ7Z309 247 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 YTHDF3Q7Z739 585 aaKnown RBP13.18□□□□□ -0.3
ACTN1-217ENST00000556203 IL17RDQ8NFM7 739 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 FANK1Q8TC84 345 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 FNDC8Q8TC99 324 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 TRMT61AQ96FX7 289 aaKnown RBP13.18□□□□□ -0.3
ACTN1-217ENST00000556203 MS4A3Q96HJ5 214 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 ZNF75AQ96N20 296 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 ZNF570Q96NI8 536 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 GRIP2Q9C0E4 1043 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 DENND2DQ9H6A0 471 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-217ENST00000556203 NRIP3Q9NQ35 241 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 CA10Q9NS85 328 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 UGT2A1Q9Y4X1 527 aa13.18□□□□□ -0.3
ACTN1-217ENST00000556203 DSCAMO60469 2012 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 DNAJC8O75937 253 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-217ENST00000556203 CD99P14209 185 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 ZNF14P17017 642 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-217ENST00000556203 NPR2P20594 1047 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 APOBEC3AP31941 199 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-217ENST00000556203 HMGA2P52926 109 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 MRPS34P82930 218 aaKnown RBP13.17□□□□□ -0.3
ACTN1-217ENST00000556203 HGFACQ04756 655 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 KRR1Q13601 381 aaKnown RBP13.17□□□□□ -0.3
ACTN1-217ENST00000556203 RAB39AQ14964 217 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 SLC36A2Q495M3 483 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 C11orf71Q6IPW1 123 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 C1orf94Q6P1W5 598 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 PGBD2Q6P3X8 592 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 PRSS57Q6UWY2 283 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 DPY19L2P2Q6ZN68 376 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 DPPA2Q7Z7J5 298 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 ADGRG5Q8IZF4 528 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 LRRC18Q8N456 261 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 OR4F15Q8NGB8 312 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 OR4C15Q8NGM1 316 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 GNPDA2Q8TDQ7 276 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 RASD2Q96D21 266 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 TMUB1Q9BVT8 246 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 RNF121Q9H920 327 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 SIAEQ9HAT2 523 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 FBXL3Q9UKT7 428 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 IER3IP1Q9Y5U9 82 aa13.17□□□□□ -0.3
ACTN1-217ENST00000556203 SLC22A23A1A5C7 686 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 AQP12BA6NM10 295 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 CCNB2O95067 398 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 RAP2AP10114 183 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 SDHAP31040 664 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 GSSP48637 474 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 RPS6KA3P51812 740 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 PPP1R8Q12972 351 aaKnown RBP13.16□□□□□ -0.3
ACTN1-217ENST00000556203 SGCAQ16586 387 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms