RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 RBP7Q96R05 134 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 SNX18Q96RF0 628 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 CCNB1IP1Q9NPC3 277 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 KLHL9Q9P2J3 617 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 EXOGQ9Y2C4 368 aaKnown RBP9.05□□□□□ -0.96
SRP54-208ENST00000555557 FKBP7Q9Y680 259 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 IGKV3D-15A0A087WSY6 115 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 OR14I1A6ND48 311 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 RAB36O95755 333 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 TFP02787 698 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 TPOP07202 933 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 SBK2P0C263 348 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 PCMT1P22061 227 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 CRABP1P29762 137 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 ETV1P50549 477 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 HIST3H3Q16695 136 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 MEP1BQ16820 701 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 SLC35D3Q5M8T2 416 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 THEM4Q5T1C6 240 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 XAF1Q6GPH4 301 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 RPTNQ6XPR3 784 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 C3P1Q6ZMU1 363 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 P4HA3Q7Z4N8 544 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 ERI1Q8IV48 349 aaKnown RBP9.04□□□□□ -0.96
SRP54-208ENST00000555557 MCEMP1Q8IX19 187 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 OR10H4Q8NGA5 316 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 TMIGD2Q96BF3 282 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 TTTY10Q9BZA0 68 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 WDR76Q9H967 626 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 GALNT8Q9NY28 637 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 HAO2Q9NYQ3 351 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 GLTPQ9NZD2 209 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 MOKQ9UQ07 419 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 NOSIPQ9Y314 301 aaKnown RBP9.04□□□□□ -0.96
SRP54-208ENST00000555557 KIAA1549Q9HCM3 1950 aa9.04□□□□□ -0.96
SRP54-208ENST00000555557 TRIM64CA6NLI5 447 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 TTLL8A6PVC2 850 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 C12orf71A8MTZ7 269 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 J3QRE1 110 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 UPK3AO75631 287 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 PTHP01270 115 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 SCG5P05408 212 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 LCKP06239 509 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 YES1P07947 543 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 PSKH1P11801 424 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 DCKP27707 260 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 CDAP32320 146 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 CD79BP40259 229 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 CSNK1A1P48729 337 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 TUBA4AP68366 448 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 DOC2BQ14184 412 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 RNPS1Q15287 305 aaKnown RBP9.03□□□□□ -0.96
SRP54-208ENST00000555557 ACSF3Q4G176 576 aaPredicted RBP9.03□□□□□ -0.96
SRP54-208ENST00000555557 LCN1P1Q5VSP4 162 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 NUFIP2Q7Z417 695 aaKnown RBP9.03□□□□□ -0.96
SRP54-208ENST00000555557 HDDC2Q7Z4H3 204 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 CD163Q86VB7 1156 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 GCNT2Q8N0V5 402 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 RFLNBQ8N5W9 214 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 TMEM54Q969K7 222 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 ZNF837Q96EG3 531 aaPredicted RBP9.03□□□□□ -0.96
SRP54-208ENST00000555557 SLX1AQ9BQ83 275 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 RNF122Q9H9V4 155 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 BCO1Q9HAY6 547 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 FGF20Q9NP95 211 aaPredicted RBP9.03□□□□□ -0.96
SRP54-208ENST00000555557 ACOT13Q9NPJ3 140 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 NDUFA13Q9P0J0 144 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 CLCF1Q9UBD9 225 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 DIMT1Q9UNQ2 313 aaKnown RBP9.03□□□□□ -0.96
SRP54-208ENST00000555557 SPTA1P02549 2419 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 AHRRA9YTQ3 701 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 GPR171O14626 319 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 MAGEB4O15481 346 aaPredicted RBP9.03□□□□□ -0.96
SRP54-208ENST00000555557 MRPL33O75394 65 aaKnown RBP9.03□□□□□ -0.96
SRP54-208ENST00000555557 KHDRBS3O75525 346 aaKnown RBP9.03□□□□□ -0.96
SRP54-208ENST00000555557 INMTO95050 263 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 TMED1Q13445 227 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 GGTLC2Q14390 218 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 IRF3Q14653 427 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 SLC25A47Q6Q0C1 308 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 SSX6Q7RTT6 188 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 TIGD4Q8IY51 512 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 C20orf196Q8IYI0 205 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 RPRMLQ8N4K4 120 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 C9orf106Q8NAJ2 232 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 OR5M11Q96RB7 305 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 CNN2Q99439 309 aaKnown RBP9.03□□□□□ -0.96
SRP54-208ENST00000555557 ZNF649Q9BS31 505 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 RBM24Q9BX46 236 aaKnown RBP9.03□□□□□ -0.96
SRP54-208ENST00000555557 CDCA4Q9BXL8 241 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 RACGAP1Q9H0H5 632 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 C12orf49Q9H741 205 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 SEC61A2Q9H9S3 476 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 MRPL22Q9NWU5 206 aaKnown RBP9.03□□□□□ -0.96
SRP54-208ENST00000555557 EMC3Q9P0I2 261 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 FOXD3Q9UJU5 478 aaPredicted RBP9.03□□□□□ -0.96
SRP54-208ENST00000555557 COPS3Q9UNS2 423 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 ZNF175Q9Y473 711 aa9.03□□□□□ -0.96
SRP54-208ENST00000555557 NBEAQ8NFP9 2946 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 SMG1Q96Q15 3661 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms