RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 HINT3Q9NQE9 182 aaKnown RBP14.26□□□□□ -0.13
ACTN1-209ENST00000553659 NDUFB11Q9NX14 153 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 HAO2Q9NYQ3 351 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 KLRF1Q9NZS2 232 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 ARID1AO14497 2285 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 A8MXE2 369 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 IMPA2O14732 288 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 HCRTR2O43614 444 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 EVI2BP34910 448 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 ACTC1P68032 377 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 ACTA1P68133 377 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 BDH1Q02338 343 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 TMPRSS11AQ6ZMR5 421 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 BCDIN3DQ7Z5W3 292 aaKnown RBP14.25□□□□□ -0.13
ACTN1-209ENST00000553659 CXorf67Q86X51 503 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-209ENST00000553659 OR51A7Q8NH64 312 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 TMEM234Q8WY98 164 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 UFD1Q92890 307 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 TNFRSF13CQ96RJ3 184 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 HMG20AQ9NP66 347 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 TAS2R16Q9NYV7 291 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 NDRG3Q9UGV2 375 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 OSGIN1Q9UJX0 560 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 STUB1Q9UNE7 303 aa14.25□□□□□ -0.13
ACTN1-209ENST00000553659 DSCAMO60469 2012 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 PCNX3Q9H6A9 2034 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 TRAV27A0A087WT01 109 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 ARHGEF9O43307 516 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 AKAP8O43823 692 aaKnown RBP14.24□□□□□ -0.13
ACTN1-209ENST00000553659 FADS1O60427 444 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 TSPAN19P0C672 248 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 CPEP16870 476 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 NR4A1P22736 598 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 SOX6P35712 828 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 GFRA1P56159 465 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 NCS1P62166 190 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 RPS4XP62701 263 aaKnown RBP14.24□□□□□ -0.13
ACTN1-209ENST00000553659 ZNF117Q03924 483 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 ZNF846Q147U1 533 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 NDUFAF6Q330K2 333 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 PLBD1Q6P4A8 553 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 PLXDC2Q6UX71 529 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 CLEC9AQ6UXN8 241 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 GATSQ8NAP1 163 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 NDNFQ8TB73 568 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 MRPL48Q96GC5 212 aaKnown RBP14.24□□□□□ -0.13
ACTN1-209ENST00000553659 MMP27Q9H306 513 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 FKRPQ9H9S5 495 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 TAS2R10Q9NYW0 307 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 CLCF1Q9UBD9 225 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 CLEC2DQ9UHP7 191 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 ZNF229Q9UJW7 825 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 SSR3Q9UNL2 185 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 HIF3AQ9Y2N7 669 aa14.24□□□□□ -0.13
ACTN1-209ENST00000553659 CAB39Q9Y376 341 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-209ENST00000553659 FAM171A2A8MVW0 826 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 PPP1R3DO95685 299 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 MT-ATP6P00846 226 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 CXCR1P25024 350 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 SRD5A2P31213 254 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 STARP49675 285 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 LHX2P50458 406 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 ETV1P50549 477 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 POLR2HP52434 150 aaKnown RBP14.23□□□□□ -0.13
ACTN1-209ENST00000553659 MAP2K6P52564 334 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 LSM3P62310 102 aaKnown RBP14.23□□□□□ -0.13
ACTN1-209ENST00000553659 C17orf67Q0P5P2 114 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 ITGADQ13349 1161 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 TPBGQ13641 420 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 ZNF74Q16587 644 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 SLC35D3Q5M8T2 416 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 APOOLQ6UXV4 268 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 THSD4Q6ZMP0 1018 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 PLCZ1Q86YW0 608 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 GCNT2Q8N0V5 402 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 OR6S1Q8NH40 331 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 B4GALNT2Q8NHY0 566 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 SH3GL3Q99963 347 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 NANSQ9NR45 359 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 SDHAF3Q9NRP4 125 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 CHRNA9Q9UGM1 479 aa14.23□□□□□ -0.13
ACTN1-209ENST00000553659 MRPS18CQ9Y3D5 142 aaKnown RBP14.23□□□□□ -0.13
ACTN1-209ENST00000553659 IGKV1D-42A0A075B6H8 117 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 TRAV36DV7A0A075B6V5 113 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 CLDN25C9JDP6 229 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 TNFSF13O75888 250 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 HIST1H2ABP04908 130 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 HEXAP06865 529 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 ADRA2AP08913 450 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 ZNF708P17019 499 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 GALP22466 123 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 TACR3P29371 465 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 RPL4P36578 427 aaKnown RBP14.22□□□□□ -0.13
ACTN1-209ENST00000553659 CLDN18P56856 261 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 GPR50Q13585 617 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 SSX1Q16384 188 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 ZNF404Q494X3 552 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 CBLN3Q6UW01 205 aa14.22□□□□□ -0.13
ACTN1-209ENST00000553659 HIST3H2AQ7L7L0 130 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms