RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 CRYAAP02489 173 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 CECR9P0C854 216 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 B4GALT1P15291 398 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 PAX1P15863 534 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 CBR1P16152 277 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 SLC9A3P48764 834 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 CLRN1P58418 232 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 MYBPC1Q00872 1141 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 TMPRSS11FQ6ZWK6 438 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 MDP1Q86V88 176 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 CIARTQ8N365 385 aaPredicted RBP20.53■□□□□ 0.88
TDP1-205ENST00000553527 SYT14Q8NB59 555 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 OR9Q2Q8NGE9 314 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 OR13C2Q8NGS9 318 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 FOXB1Q99853 325 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 SMR3AQ99954 134 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 DLL4Q9NR61 685 aa20.53■□□□□ 0.88
TDP1-205ENST00000553527 GDF2Q9UK05 429 aaPredicted RBP20.53■□□□□ 0.88
TDP1-205ENST00000553527 H7C1Q1 480 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 QDPRP09417 244 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 PAX7P23759 505 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 NAAAQ02083 359 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 RUNX1T1Q06455 604 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 MICAQ29983 383 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 PGBD2Q6P3X8 592 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 LRFN4Q6PJG9 635 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 VHLLQ6RSH7 139 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 OAFQ86UD1 273 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 DTX2Q86UW9 622 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 MYPOPQ86VE0 399 aaPredicted RBP20.52■□□□□ 0.88
TDP1-205ENST00000553527 OR10G2Q8NGC3 310 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 OR51A7Q8NH64 312 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 C18orf12Q96KH6 178 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 CACNG6Q9BXT2 260 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 CBLN4Q9NTU7 201 aa20.52■□□□□ 0.88
TDP1-205ENST00000553527 CRNNQ9UBG3 495 aaPredicted RBP20.52■□□□□ 0.88
TDP1-205ENST00000553527 H3BNX3 289 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 CDC42EP2O14613 210 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 IGHG1P01857 330 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 PGA4P0DJD7 388 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 PGA3P0DJD8 388 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 FOSL1P15407 271 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 ZER1Q7Z7L7 766 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 IGFN1Q86VF2 1251 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 AQP11Q8NBQ7 271 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 LRTOMTQ8WZ04 291 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 HTRA1Q92743 480 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 BDH2Q9BUT1 245 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 KATNB1Q9BVA0 655 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 HIF3AQ9Y2N7 669 aa20.51■□□□□ 0.87
TDP1-205ENST00000553527 TRAV27A0A087WT01 109 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 IGKV3-15P01624 115 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 IGLV1-44P01699 117 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 INHBBP09529 407 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 FPR3P25089 353 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 CALCRP30988 508 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 APOBEC3AP31941 199 aaPredicted RBP20.5■□□□□ 0.87
TDP1-205ENST00000553527 ARR3P36575 388 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 ARHGDIAP52565 204 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 TOP3AQ13472 1001 aaPredicted RBP20.5■□□□□ 0.87
TDP1-205ENST00000553527 ALG10Q5BKT4 473 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 ZNF544Q6NX49 715 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 C1orf94Q6P1W5 598 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 TMEM179BQ7Z7N9 219 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 CCDC36Q8IYA8 594 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 GNPDA2Q8TDQ7 276 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 GIPC3Q8TF64 312 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 ASB10Q8WXI3 467 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 FBXO17Q96EF6 278 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 NDEL1Q9GZM8 345 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 S100A14Q9HCY8 104 aa20.5■□□□□ 0.87
TDP1-205ENST00000553527 PDP1Q9P0J1 537 aaPredicted RBP20.5■□□□□ 0.87
TDP1-205ENST00000553527 ARRDC5A6NEK1 342 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 UNC119BA6NIH7 251 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 DHHO43323 396 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 TRMUO75648 421 aaKnown RBP20.49■□□□□ 0.87
TDP1-205ENST00000553527 PATE4P0C8F1 98 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 ACADSP16219 412 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 PTDSS1P48651 473 aaKnown RBP20.49■□□□□ 0.87
TDP1-205ENST00000553527 DAP3P51398 398 aaKnown RBP20.49■□□□□ 0.87
TDP1-205ENST00000553527 CLEC12BQ2HXU8 276 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 GSG1Q2KHT4 349 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 ANKDD1AQ495B1 522 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 ZNF770Q6IQ21 691 aaPredicted RBP20.49■□□□□ 0.87
TDP1-205ENST00000553527 SHQ1Q6PI26 577 aaKnown RBP20.49■□□□□ 0.87
TDP1-205ENST00000553527 Q71RC1 249 aaPredicted RBP20.49■□□□□ 0.87
TDP1-205ENST00000553527 AMIGO2Q86SJ2 522 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 MCHR2Q969V1 340 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 TNFRSF13CQ96RJ3 184 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 GPA33Q99795 319 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 NTN4Q9HB63 628 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 NOX3Q9HBY0 568 aa20.49■□□□□ 0.87
TDP1-205ENST00000553527 MOV10Q9HCE1 1003 aaKnown RBP20.49■□□□□ 0.87
TDP1-205ENST00000553527 RRP9O43818 475 aaKnown RBP20.48■□□□□ 0.87
TDP1-205ENST00000553527 IGHV4-39P01824 125 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 TSPAN19P0C672 248 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 ACVR1BP36896 505 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 GSSP48637 474 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 CTXN1P60606 82 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 RAB1AP62820 205 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms