RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 SH3BGRP55822 239 aaPredicted RBP13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 CLRN1P58418 232 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 SLC34A1Q06495 639 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 NPRL3Q12980 569 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 SNTB1Q13884 538 aaKnown RBP13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 ETFDHQ16134 617 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 THEM4Q5T1C6 240 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 C12orf73Q69YU5 71 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 ZBTB49Q6ZSB9 765 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 BHLHA15Q7RTS1 189 aaPredicted RBP13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 ZBTB46Q86UZ6 589 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 SLC37A3Q8NCC5 494 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 SDR9C7Q8NEX9 313 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 ZNRF4Q8WWF5 429 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 KISS1RQ969F8 398 aaPredicted RBP13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 NABP1Q96AH0 204 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 EME1Q96AY2 570 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 TSSK2Q96PF2 358 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 SPOCK3Q9BQ16 436 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 HDHD5Q9BXW7 423 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 GRIP2Q9C0E4 1043 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 ACTR6Q9GZN1 396 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 SYT4Q9H2B2 425 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 TMEM38BQ9NVV0 291 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 ZNF224Q9NZL3 707 aa13.01□□□□□ -0.33
MTHFD1-204ENST00000553405 PRSS44E7EML9 344 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 XKRYO14609 159 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 SURF4O15260 269 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 RAD51DO75771 328 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 SNAP29O95721 258 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 SCG5P05408 212 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 NOS3P29474 1203 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 CD47Q08722 323 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 CRMP1Q14194 572 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 LEG1Q6P5S2 330 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 ABHD12BQ7Z5M8 362 aaPredicted RBP13□□□□□ -0.33
MTHFD1-204ENST00000553405 OR6V1Q8N148 313 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 STEAP2Q8NFT2 490 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 OR52E2Q8NGJ4 325 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 FNDC8Q8TC99 324 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 HTRA1Q92743 480 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 WFIKKN1Q96NZ8 548 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 HCAR1Q9BXC0 346 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 NUAK2Q9H093 628 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 B3GAT2Q9NPZ5 323 aa13□□□□□ -0.33
MTHFD1-204ENST00000553405 OR5H1A6NKK0 313 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 SIAH2O43255 324 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 SEC14L2O76054 403 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 ATP6V1G2O95670 118 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 MRPS34P82930 218 aaKnown RBP12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 TAB1Q15750 504 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 TBRG1Q3YBR2 411 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 NRN1LQ496H8 165 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 HIKESHIQ53FT3 197 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 ANKRD16Q6P6B7 361 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 C17orf78Q8N4C9 275 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 PACRGLQ8N7B6 248 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 CYB561A3Q8NBI2 242 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 LINC01560Q8TB33 94 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 PTP4A1Q93096 173 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 RBP7Q96R05 134 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 PITX2Q99697 317 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 FOXB1Q99853 325 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 FN3KQ9H479 309 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 TOR3AQ9H497 397 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 SLC17A5Q9NRA2 495 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 B3GNT2Q9NY97 397 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 KLHL21Q9UJP4 597 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 B9D1Q9UPM9 204 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 SLC25A15Q9Y619 301 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 TACC2O95359 2948 aa12.99□□□□□ -0.33
MTHFD1-204ENST00000553405 ARPC4-TTLL3A0A0A6YYG9 625 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 H0YHG0 523 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 M0R129 80 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 KRT33AO76009 404 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 GAAP10253 952 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 B4GALT1P15291 398 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 PPP3CBP16298 524 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 IL32P24001 234 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 COL8A1P27658 744 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 LOXP28300 417 aaPredicted RBP12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 CDAP32320 146 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 SLC25A1P53007 311 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 TGFBR3Q03167 851 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 LRRC36Q1X8D7 754 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 TIMM23BQ5SRD1 257 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 LINC01590Q5TEZ4 76 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 OR7E24Q6IFN5 339 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 P2RY8Q86VZ1 359 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 FGFBP3Q8TAT2 258 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 LRRC46Q96FV0 321 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 HRASLS5Q96KN8 279 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 ZNF75AQ96N20 296 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 RDH12Q96NR8 316 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 RACGAP1Q9H0H5 632 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 RIBC2Q9H4K1 309 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 NOX3Q9HBY0 568 aa12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 HINT3Q9NQE9 182 aaKnown RBP12.98□□□□□ -0.33
MTHFD1-204ENST00000553405 RPRD1BQ9NQG5 326 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms