RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 RPS6KA3P51812 740 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 MYBPC1Q00872 1141 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 FMODQ06828 376 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 THEM4Q5T1C6 240 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 CLDN22Q8N7P3 220 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 KBTBD8Q8NFY9 601 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 OR10G2Q8NGC3 310 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 OR52L1Q8NGH7 329 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 UTP4Q969X6 686 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 SLCO4A1Q96BD0 722 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 RASD2Q96D21 266 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 RADILQ96JH8 1075 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 Q96M85 177 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 SLC38A2Q96QD8 506 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 DENND2DQ9H6A0 471 aaPredicted RBP10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 UBTD1Q9HAC8 227 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 DNAJB9Q9UBS3 223 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 FBXL3Q9UKT7 428 aa10.22□□□□□ -0.77
TRAFD1-209ENST00000552896 ARFGEF3Q5TH69 2177 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 IGHV1-18A0A0C4DH31 117 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 PRSS37A4D1T9 235 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF503-AS2A6NEH8 195 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 SHISA9B4DS77 424 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 GNGT2O14610 69 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 IMPA2O14732 288 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 ARPC3O15145 178 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 MGRN1O60291 552 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 DEAF1O75398 565 aaPredicted RBP10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 E2F6O75461 281 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 UBL3O95164 117 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 ATE1O95260 518 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 FARS2O95363 451 aaKnown RBP10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 PPP1R3DO95685 299 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 PLAUP00749 431 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 OR8G3PP0DMU2 310 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 GSTM3P21266 225 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 ARR3P36575 388 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 CAPZA2P47755 286 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 CDH11P55287 796 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 TUBA1BP68363 451 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 TUBA4AP68366 448 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 MRPS34P82930 218 aaKnown RBP10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 SPOCK1Q08629 439 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 PPP1R8Q12972 351 aaKnown RBP10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 CCNIQ14094 377 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 GSG1Q2KHT4 349 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 RFX4Q33E94 735 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF672Q499Z4 452 aaPredicted RBP10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 SLC25A47Q6Q0C1 308 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 CD300LDQ6UXZ3 194 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 RASSF6Q6ZTQ3 369 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 FOXL2NBQ6ZUU3 175 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 TUBA1AQ71U36 451 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 DPPA2Q7Z7J5 298 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 SLC22A24Q8N4F4 322 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 GIPC3Q8TF64 312 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 FBXW5Q969U6 566 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 DUS3LQ96G46 650 aaKnown RBP10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 RBP7Q96R05 134 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 SNX18Q96RF0 628 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 LIME1Q9H400 295 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 ARMC1Q9NVT9 282 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 B3GNT2Q9NY97 397 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF224Q9NZL3 707 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 VSX1Q9NZR4 365 aaPredicted RBP10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 IL20RAQ9UHF4 553 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 UGT2A1Q9Y4X1 527 aa10.21□□□□□ -0.77
TRAFD1-209ENST00000552896 MAP1AP78559 2803 aaPredicted RBP10.21□□□□□ -0.78
TRAFD1-209ENST00000552896 IGKV1D-43A0A0B4J1Z2 117 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 SLC22A23A1A5C7 686 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 H7C1C5 153 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 SOCS2O14508 198 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 ARHGEF9O43307 516 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 IDH3BO43837 385 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 GASTP01350 101 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 HLA-HP01893 362 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 CECR9P0C854 216 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 FCGR1AP12314 374 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 CBR1P16152 277 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 NPR2P20594 1047 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 DNASE1P24855 282 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 IST1P53990 364 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 LCN6P62502 163 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 CHD3Q12873 2000 aaKnown RBP10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 YTHDF3Q7Z739 585 aaKnown RBP10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 MDP1Q86V88 176 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 ZNF611Q8N823 705 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 LILRB1Q8NHL6 650 aaPredicted RBP10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 AKAP1Q92667 903 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 NABP1Q96AH0 204 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 MBD6Q96DN6 1003 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 SAMD8Q96LT4 415 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 ERMAPQ96PL5 475 aaPredicted RBP10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 IFT27Q9BW83 186 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 C1QTNF6Q9BXI9 259 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 EGLN3Q9H6Z9 239 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 TBC1D23Q9NUY8 699 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 IL20Q9NYY1 176 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 PLEKHA6Q9Y2H5 1048 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms